Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIW14487.1 | AIW14660.1 | IX91_09770 | IX91_10670 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleoid-associated protein NdpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.712 |
| AIW14487.1 | AIW14661.1 | IX91_09770 | IX91_10675 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0352 family. | 0.757 |
| AIW14487.1 | AIW14662.1 | IX91_09770 | IX91_10680 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.684 |
| AIW14487.1 | AIW15015.1 | IX91_09770 | IX91_12645 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipoprotein NlpI; May be involved in cell division. | 0.771 |
| AIW14487.1 | AIW15275.1 | IX91_09770 | IX91_14145 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA adenine methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.494 |
| AIW14487.1 | fadR | IX91_09770 | IX91_09735 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | GntR family transcriptional regulator; Multifunctional regulator of fatty acid metabolism. | 0.724 |
| AIW14487.1 | metJ | IX91_09770 | IX91_14380 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Met repressor; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family. | 0.758 |
| AIW14487.1 | mutH | IX91_09770 | IX91_02655 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA mismatch repair protein MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family. | 0.720 |
| AIW14487.1 | rraB | IX91_09770 | IX91_13350 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Regulator; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. | 0.770 |
| AIW14487.1 | seqA | IX91_09770 | IX91_04090 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Replication initiation regulator SeqA; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated. | 0.749 |
| AIW14660.1 | AIW14487.1 | IX91_10670 | IX91_09770 | Nucleoid-associated protein NdpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.712 |
| AIW14660.1 | AIW14661.1 | IX91_10670 | IX91_10675 | Nucleoid-associated protein NdpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0352 family. | 0.840 |
| AIW14660.1 | AIW14662.1 | IX91_10670 | IX91_10680 | Nucleoid-associated protein NdpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.869 |
| AIW14660.1 | AIW15015.1 | IX91_10670 | IX91_12645 | Nucleoid-associated protein NdpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipoprotein NlpI; May be involved in cell division. | 0.622 |
| AIW14660.1 | metJ | IX91_10670 | IX91_14380 | Nucleoid-associated protein NdpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Met repressor; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family. | 0.560 |
| AIW14660.1 | rraB | IX91_10670 | IX91_13350 | Nucleoid-associated protein NdpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Regulator; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. | 0.591 |
| AIW14660.1 | seqA | IX91_10670 | IX91_04090 | Nucleoid-associated protein NdpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Replication initiation regulator SeqA; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated. | 0.645 |
| AIW14661.1 | AIW14487.1 | IX91_10675 | IX91_09770 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0352 family. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
| AIW14661.1 | AIW14660.1 | IX91_10675 | IX91_10670 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0352 family. | Nucleoid-associated protein NdpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.840 |
| AIW14661.1 | AIW14662.1 | IX91_10675 | IX91_10680 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0352 family. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.872 |
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