(5 nodes) Prokaryotic N-terminal methylation site, and Invasin/intimin cell-adhesion fragments network (Vibrio tubiashii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIW15142.1	MSHA biogenesis protein MshQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (1067 aa)
	AIW15143.1	MSHA biogenesis protein MshP; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
	AIW15144.1	MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
	AIW15145.1	MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
	AIW15146.1	MSHA biogenesis protein MshC; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)

Your Current Organism:

Vibrio tubiashii

NCBI taxonomy Id: 1051646
Other names: V. tubiashii ATCC 19109, Vibrio tubiashii ATCC 19109, Vibrio tubiashii LMG 10396, Vibrio tubiashii NBRC 15644, Vibrio tubiashii str. ATCC 19109, Vibrio tubiashii strain ATCC 19109

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIW15142.1	AIW15143.1	IX91_13405	IX91_13410	MSHA biogenesis protein MshQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshP; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804
AIW15142.1	AIW15144.1	IX91_13405	IX91_13415	MSHA biogenesis protein MshQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AIW15142.1	AIW15145.1	IX91_13405	IX91_13420	MSHA biogenesis protein MshQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AIW15142.1	AIW15146.1	IX91_13405	IX91_13425	MSHA biogenesis protein MshQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804
AIW15143.1	AIW15142.1	IX91_13410	IX91_13405	MSHA biogenesis protein MshP; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804
AIW15143.1	AIW15144.1	IX91_13410	IX91_13415	MSHA biogenesis protein MshP; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AIW15143.1	AIW15145.1	IX91_13410	IX91_13420	MSHA biogenesis protein MshP; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AIW15143.1	AIW15146.1	IX91_13410	IX91_13425	MSHA biogenesis protein MshP; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AIW15144.1	AIW15142.1	IX91_13415	IX91_13405	MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AIW15144.1	AIW15143.1	IX91_13415	IX91_13410	MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshP; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AIW15144.1	AIW15145.1	IX91_13415	IX91_13420	MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
AIW15144.1	AIW15146.1	IX91_13415	IX91_13425	MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
AIW15145.1	AIW15142.1	IX91_13420	IX91_13405	MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AIW15145.1	AIW15143.1	IX91_13420	IX91_13410	MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshP; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AIW15145.1	AIW15144.1	IX91_13420	IX91_13415	MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
AIW15145.1	AIW15146.1	IX91_13420	IX91_13425	MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804
AIW15146.1	AIW15142.1	IX91_13425	IX91_13405	MSHA biogenesis protein MshC; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshQ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804
AIW15146.1	AIW15143.1	IX91_13425	IX91_13410	MSHA biogenesis protein MshC; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshP; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AIW15146.1	AIW15144.1	IX91_13425	IX91_13415	MSHA biogenesis protein MshC; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
AIW15146.1	AIW15145.1	IX91_13425	IX91_13420	MSHA biogenesis protein MshC; Derived by automated computational analysis using gene prediction method: Protein Homology.	MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804

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