STRINGSTRING
AIW13544.1 AIW13544.1 AIW13966.1 AIW13966.1 AIW13967.1 AIW13967.1 AIW13968.1 AIW13968.1 AIW13969.1 AIW13969.1 AIW13970.1 AIW13970.1 AIW13974.1 AIW13974.1 AIW13975.1 AIW13975.1 AIW13976.1 AIW13976.1 AIW13978.1 AIW13978.1 AIW13979.1 AIW13979.1 AIW13980.1 AIW13980.1 AIW13981.1 AIW13981.1 AIW13982.1 AIW13982.1 AIW13983.1 AIW13983.1 AIW13984.1 AIW13984.1 AIW13985.1 AIW13985.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIW13544.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family. (888 aa)
AIW13966.1Type VI secretion protein IcmF; Derived by automated computational analysis using gene prediction method: Protein Homology. (1124 aa)
AIW13967.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
AIW13968.1Type VI secretion lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
AIW13969.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
AIW13970.1Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
AIW13974.1ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family. (870 aa)
AIW13975.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
AIW13976.1Protein ImpG/VasA; Derived by automated computational analysis using gene prediction method: Protein Homology. (583 aa)
AIW13978.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)
AIW13979.1EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (492 aa)
AIW13980.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
AIW13981.1Protein ImpD; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)
AIW13982.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
AIW13983.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (99 aa)
AIW13984.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
AIW13985.1Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: Protein Homology. (660 aa)
Your Current Organism:
Vibrio tubiashii
NCBI taxonomy Id: 1051646
Other names: V. tubiashii ATCC 19109, Vibrio tubiashii ATCC 19109, Vibrio tubiashii LMG 10396, Vibrio tubiashii NBRC 15644, Vibrio tubiashii str. ATCC 19109, Vibrio tubiashii strain ATCC 19109
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