STRINGSTRING
AIW13104.1 AIW13104.1 AIW13286.1 AIW13286.1 AIW13888.1 AIW13888.1 AIW14943.1 AIW14943.1 rhtB rhtB AIW15742.1 AIW15742.1 AIW16544.1 AIW16544.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIW13104.1Branched-chain amino acid transporter; Component of the transport system for branched-chain amino acids. (437 aa)
AIW13286.1Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (512 aa)
AIW13888.1Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
AIW14943.1Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)
rhtBHomoserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
AIW15742.1Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
AIW16544.1Alanine glycine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
Your Current Organism:
Vibrio tubiashii
NCBI taxonomy Id: 1051646
Other names: V. tubiashii ATCC 19109, Vibrio tubiashii ATCC 19109, Vibrio tubiashii LMG 10396, Vibrio tubiashii NBRC 15644, Vibrio tubiashii str. ATCC 19109, Vibrio tubiashii strain ATCC 19109
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