STRINGSTRING
AIW13091.1 AIW13091.1 nagZ nagZ AIW14203.1 AIW14203.1 AIW14241.1 AIW14241.1 AIW14242.1 AIW14242.1 AIW14492.1 AIW14492.1 oppD oppD AIW14494.1 AIW14494.1 oppB oppB AIW14496.1 AIW14496.1 mrdA mrdA AIW14837.1 AIW14837.1 AIW14923.1 AIW14923.1 ftsI ftsI tolC tolC AIW15284.1 AIW15284.1 AIW15417.1 AIW15417.1 AIW15418.1 AIW15418.1 AIW15419.1 AIW15419.1 AIW15619.1 AIW15619.1 AIW15781.1 AIW15781.1 oppD-2 oppD-2 AIW15783.1 AIW15783.1 oppB-2 oppB-2 AIW15785.1 AIW15785.1 AIW16183.1 AIW16183.1 AIW16229.1 AIW16229.1 mrdA-2 mrdA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIW13091.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
nagZBeta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (328 aa)
AIW14203.1Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
AIW14241.1Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1022 aa)
AIW14242.1RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (396 aa)
AIW14492.1Peptide ABC transporter ATP-binding protein; With OppABCD is involved in the transport of oligopeptides; OppF and OppD are ATP-binding proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
oppDOligopeptide transporter ATP-binding component; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (323 aa)
AIW14494.1Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
oppBOligopeptide transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
AIW14496.1Peptide ABC transporter substrate-binding protein; Is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa)
mrdAPenicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. (628 aa)
AIW14837.1Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (356 aa)
AIW14923.1Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)
ftsICell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. (574 aa)
tolCTrimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
AIW15284.1Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (839 aa)
AIW15417.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
AIW15418.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (368 aa)
AIW15419.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1040 aa)
AIW15619.1Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (361 aa)
AIW15781.1Peptide ABC transporter ATP-binding protein; With OppABCD is involved in the transport of oligopeptides; OppF and OppD are ATP-binding proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
oppD-2Oligopeptide transporter ATP-binding component; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (329 aa)
AIW15783.1Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
oppB-2Oligopeptide transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
AIW15785.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)
AIW16183.1Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (540 aa)
AIW16229.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (372 aa)
mrdA-2Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. (633 aa)
Your Current Organism:
Vibrio tubiashii
NCBI taxonomy Id: 1051646
Other names: V. tubiashii ATCC 19109, Vibrio tubiashii ATCC 19109, Vibrio tubiashii LMG 10396, Vibrio tubiashii NBRC 15644, Vibrio tubiashii str. ATCC 19109, Vibrio tubiashii strain ATCC 19109
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