68 items (Terfezia boudieri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3N4LAP4	37S ribosomal protein S25. (243 aa)
	A0A3N4M5D3	L51_S25_CI-B8 domain-containing protein. (168 aa)
	A0A3N4M516	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (299 aa)
	A0A3N4M490	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (474 aa)
	A0A3N4M423	Uncharacterized protein. (160 aa)
	A0A3N4M3N5	L51_S25_CI-B8 domain-containing protein. (137 aa)
	A0A3N4M3J4	Uncharacterized protein. (116 aa)
	A0A3N4M3F7	Ribosomal protein S7. (179 aa)
	A0A3N4M369	Translational machinery component. (128 aa)
	A0A3N4M2U4	MRP-L47-domain-containing protein. (236 aa)
	A0A3N4M2N0	Mitochondrial 54S ribosomal protein YmL19; Belongs to the universal ribosomal protein uL11 family. (153 aa)
	A0A3N4M1E8	Alpha-L RNA-binding motif-containing protein. (328 aa)
	A0A3N4M1C5	Manganese and iron superoxide dismutase. (303 aa)
	A0A3N4LZD1	Ribosomal protein L1. (311 aa)
	A0A3N4LZ61	SET domain-containing protein. (766 aa)
	A0A3N4LYY4	Uncharacterized protein. (283 aa)
	A0A3N4LYN8	Mitochondrial ribosomal protein S16. (117 aa)
	A0A3N4LYM2	Uncharacterized protein. (322 aa)
	A0A3N4LY64	Ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family. (226 aa)
	A0A3N4LXN3	Uncharacterized protein. (221 aa)
	A0A3N4LXD4	Uncharacterized protein. (106 aa)
	A0A3N4LWZ1	Uncharacterized protein. (539 aa)
	A0A3N4LV70	Uncharacterized protein. (221 aa)
	A0A3N4LV60	Ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family. (231 aa)
	A0A3N4LV00	RF_PROK_I domain-containing protein. (190 aa)
	A0A3N4LUX0	Ribosomal protein L27. (241 aa)
	A0A3N4LUK5	Ribosomal protein S13. (119 aa)
	A0A3N4LU59	54S ribosomal protein L38, mitochondrial; Belongs to the universal ribosomal protein uL14 family. (131 aa)
	A0A3N4LTZ1	Uncharacterized protein. (67 aa)
	A0A3N4LT60	Uncharacterized protein. (127 aa)
	A0A3N4LT15	Uncharacterized protein. (257 aa)
	A0A3N4LRW8	Mitochondrial 54S ribosomal protein YmL23. (174 aa)
	A0A3N4LRW1	Ribosomal protein S2. (255 aa)
	A0A3N4LR70	ClpS-like protein. (176 aa)
	A0A3N4LPZ9	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (200 aa)
	A0A3N4LPP1	Uncharacterized protein. (218 aa)
	A0A3N4LNR6	Putative mitochondrial 37S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (94 aa)
	A0A3N4LNH3	Ribosomal protein S16, mitochondrial. (117 aa)
	A0A3N4LMT6	Uncharacterized protein. (310 aa)
	A0A3N4LMH2	Ribosomal protein L30-containing protein. (90 aa)
	A0A3N4LMA6	Uncharacterized protein. (93 aa)
	A0A3N4LK37	Uncharacterized protein. (145 aa)
	A0A3N4LJS5	Ribonuclease III. (342 aa)
	A0A3N4LJM8	Ribosomal protein S8. (155 aa)
	A0A3N4LJJ2	Uncharacterized protein. (103 aa)
	A0A3N4LJ33	Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (179 aa)
	A0A3N4LGJ3	Uncharacterized protein. (339 aa)
	A0A3N4LDF7	MRP-S28 domain-containing protein. (125 aa)
	A0A3N4LDE6	Putative mitochondrial 40s ribosomal protein. (117 aa)
	A0A3N4LD30	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (336 aa)
	A0A3N4LD11	Ribosomal protein S12/S23. (127 aa)
	A0A3N4LBL5	Uncharacterized protein. (189 aa)
	A0A3N4LAY4	Uncharacterized protein. (256 aa)
	A0A3N4M6F3	Uncharacterized protein. (115 aa)
	A0A3N4MKN4	Uncharacterized protein. (143 aa)
	A0A3N4MJG5	Uncharacterized protein. (376 aa)
	A0A3N4MJD0	Translation protein; Belongs to the universal ribosomal protein uL3 family. (203 aa)
	A0A3N4MB68	Ribosomal protein L5. (330 aa)
	A0A3N4M8K9	PEBP-like protein. (374 aa)
	A0A3N4M8D2	Ribosomal_L18e/L15P domain-containing protein. (261 aa)
	A0A3N4M839	50S ribosomal protein-like protein L4. (292 aa)
	A0A3N4M7Q1	Mitoc_mL59 domain-containing protein. (152 aa)
	A0A3N4M7J6	Ribosomal protein S18. (246 aa)
	A0A3N4M6Z0	Ribosomal protein L2. (378 aa)
	A0A3N4M6T9	Ribosomal protein L25/L23. (110 aa)
	A0A3N4L9X4	Uncharacterized protein. (58 aa)
	A0A3N4LAC2	Protein phosphatase methylesterase. (381 aa)
	A0A3N4LAG5	MRP-L46 domain-containing protein. (352 aa)

Your Current Organism:

Terfezia boudieri

NCBI taxonomy Id: 1051890
Other names: T. boudieri ATCC MYA-4762, Terfezia boudieri ATCC MYA-4762, Terfezia boudieri S1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3N4L9X4	A0A3N4LAG5	Uncharacterized protein.	MRP-L46 domain-containing protein.	0.986
A0A3N4L9X4	A0A3N4LAP4	Uncharacterized protein.	37S ribosomal protein S25.	0.941
A0A3N4L9X4	A0A3N4LAY4	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A3N4L9X4	A0A3N4LBL5	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A3N4L9X4	A0A3N4LD11	Uncharacterized protein.	Ribosomal protein S12/S23.	0.997
A0A3N4L9X4	A0A3N4LD30	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.998
A0A3N4L9X4	A0A3N4LDE6	Uncharacterized protein.	Putative mitochondrial 40s ribosomal protein.	0.997
A0A3N4L9X4	A0A3N4LDF7	Uncharacterized protein.	MRP-S28 domain-containing protein.	0.981
A0A3N4L9X4	A0A3N4LGJ3	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A3N4L9X4	A0A3N4LJ33	Uncharacterized protein.	Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.999
A0A3N4L9X4	A0A3N4LJJ2	Uncharacterized protein.	Uncharacterized protein.	0.985
A0A3N4L9X4	A0A3N4LJM8	Uncharacterized protein.	Ribosomal protein S8.	0.994
A0A3N4L9X4	A0A3N4LJS5	Uncharacterized protein.	Ribonuclease III.	0.969
A0A3N4L9X4	A0A3N4LK37	Uncharacterized protein.	Uncharacterized protein.	0.967
A0A3N4L9X4	A0A3N4LMA6	Uncharacterized protein.	Uncharacterized protein.	0.892
A0A3N4L9X4	A0A3N4LMH2	Uncharacterized protein.	Ribosomal protein L30-containing protein.	0.973
A0A3N4L9X4	A0A3N4LNH3	Uncharacterized protein.	Ribosomal protein S16, mitochondrial.	0.990
A0A3N4L9X4	A0A3N4LNR6	Uncharacterized protein.	Putative mitochondrial 37S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	0.968
A0A3N4L9X4	A0A3N4LPP1	Uncharacterized protein.	Uncharacterized protein.	0.947
A0A3N4L9X4	A0A3N4LPZ9	Uncharacterized protein.	Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.977