27 items (Terfezia boudieri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3N4LMA6	Uncharacterized protein. (93 aa)
	A0A3N4LJM8	Ribosomal protein S8. (155 aa)
	A0A3N4LGJ3	Uncharacterized protein. (339 aa)
	A0A3N4LDF7	MRP-S28 domain-containing protein. (125 aa)
	A0A3N4LDE6	Putative mitochondrial 40s ribosomal protein. (117 aa)
	A0A3N4M516	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (299 aa)
	A0A3N4M490	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (474 aa)
	A0A3N4M3J4	Uncharacterized protein. (116 aa)
	A0A3N4M3F7	Ribosomal protein S7. (179 aa)
	A0A3N4M369	Translational machinery component. (128 aa)
	A0A3N4M1E8	Alpha-L RNA-binding motif-containing protein. (328 aa)
	A0A3N4M1C5	Manganese and iron superoxide dismutase. (303 aa)
	A0A3N4M7J6	Ribosomal protein S18. (246 aa)
	A0A3N4LZ61	SET domain-containing protein. (766 aa)
	A0A3N4LYN8	Mitochondrial ribosomal protein S16. (117 aa)
	A0A3N4LYM2	Uncharacterized protein. (322 aa)
	A0A3N4LXD4	Uncharacterized protein. (106 aa)
	A0A3N4LWZ1	Uncharacterized protein. (539 aa)
	A0A3N4LD11	Ribosomal protein S12/S23. (127 aa)
	A0A3N4LAP4	37S ribosomal protein S25. (243 aa)
	A0A3N4LAC2	Protein phosphatase methylesterase. (381 aa)
	A0A3N4LUK5	Ribosomal protein S13. (119 aa)
	A0A3N4LT15	Uncharacterized protein. (257 aa)
	A0A3N4LD30	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (336 aa)
	A0A3N4LNR6	Putative mitochondrial 37S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (94 aa)
	A0A3N4LRW1	Ribosomal protein S2. (255 aa)
	A0A3N4LNH3	Ribosomal protein S16, mitochondrial. (117 aa)

Your Current Organism:

Terfezia boudieri

NCBI taxonomy Id: 1051890
Other names: T. boudieri ATCC MYA-4762, Terfezia boudieri ATCC MYA-4762, Terfezia boudieri S1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3N4LAP4	A0A3N4LD11	37S ribosomal protein S25.	Ribosomal protein S12/S23.	0.958
A0A3N4LAP4	A0A3N4LD30	37S ribosomal protein S25.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.974
A0A3N4LAP4	A0A3N4LDE6	37S ribosomal protein S25.	Putative mitochondrial 40s ribosomal protein.	0.939
A0A3N4LAP4	A0A3N4LDF7	37S ribosomal protein S25.	MRP-S28 domain-containing protein.	0.966
A0A3N4LAP4	A0A3N4LGJ3	37S ribosomal protein S25.	Uncharacterized protein.	0.954
A0A3N4LAP4	A0A3N4LJM8	37S ribosomal protein S25.	Ribosomal protein S8.	0.950
A0A3N4LAP4	A0A3N4LMA6	37S ribosomal protein S25.	Uncharacterized protein.	0.964
A0A3N4LAP4	A0A3N4LNH3	37S ribosomal protein S25.	Ribosomal protein S16, mitochondrial.	0.895
A0A3N4LAP4	A0A3N4LNR6	37S ribosomal protein S25.	Putative mitochondrial 37S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.	0.936
A0A3N4LAP4	A0A3N4LRW1	37S ribosomal protein S25.	Ribosomal protein S2.	0.971
A0A3N4LAP4	A0A3N4LT15	37S ribosomal protein S25.	Uncharacterized protein.	0.958
A0A3N4LAP4	A0A3N4LUK5	37S ribosomal protein S25.	Ribosomal protein S13.	0.951
A0A3N4LAP4	A0A3N4LWZ1	37S ribosomal protein S25.	Uncharacterized protein.	0.957
A0A3N4LAP4	A0A3N4LXD4	37S ribosomal protein S25.	Uncharacterized protein.	0.960
A0A3N4LAP4	A0A3N4LYM2	37S ribosomal protein S25.	Uncharacterized protein.	0.959
A0A3N4LAP4	A0A3N4LYN8	37S ribosomal protein S25.	Mitochondrial ribosomal protein S16.	0.895
A0A3N4LAP4	A0A3N4M1C5	37S ribosomal protein S25.	Manganese and iron superoxide dismutase.	0.966
A0A3N4LAP4	A0A3N4M1E8	37S ribosomal protein S25.	Alpha-L RNA-binding motif-containing protein.	0.935
A0A3N4LAP4	A0A3N4M369	37S ribosomal protein S25.	Translational machinery component.	0.946
A0A3N4LAP4	A0A3N4M3F7	37S ribosomal protein S25.	Ribosomal protein S7.	0.965