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| | glsA | Glutaminase 1; Belongs to the glutaminase family. (324 aa) |
| | GYO_0563 | Putative surfactin synthethase subunit 2 SrfAB. (3583 aa) |
| | GYO_0564 | Putative surfactin synthethase subunit 3 SrfAC. (1275 aa) |
| | srfAD | Surfactin synthetase thioesterase subunit SrfAD. (242 aa) |
| | GYO_0570 | 4'-phosphopantetheinyl transferase sfp; Belongs to the P-Pant transferase superfamily. (224 aa) |
| | GYO_0605 | Transcriptional regulator. (479 aa) |
| | gabT | 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (436 aa) |
| | GYO_0607 | Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (462 aa) |
| | GYO_0620 | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase. (130 aa) |
| | GYO_0635 | AMP-dependent synthetase and ligase. (503 aa) |
| | acpS | Holo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (121 aa) |
| | GYO_0716 | TetR-family regulatory protein. (191 aa) |
| | GYO_0717 | Oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (249 aa) |
| | GYO_0718 | Oxidoreductase, zinc-binding protein. (337 aa) |
| | GYO_0746 | Carbonyl reductase [NADPH] 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (235 aa) |
| | GYO_0753 | YdeL. (463 aa) |
| | GYO_0754 | MaoC like domain, putative. (141 aa) |
| | GYO_0830 | UDP-glycosyltransferase,Glycosyl Transferase Family 1. (395 aa) |
| | gabP | Gaba permease. (468 aa) |
| | GYO_0986 | Cytochrome P450 family; Functions as a fatty acid monooxygenase. In the N-terminal section; belongs to the cytochrome P450 family. (1061 aa) |
| | GYO_1030 | Acylphosphatase. (91 aa) |
| | GYO_1075 | TPP-dependent acetoin dehydrogenase alpha-subunit. (333 aa) |
| | GYO_1076 | Acetoin:2,6-dichlorophenolindophenol oxidoreductase beta subunit. (342 aa) |
| | GYO_1077 | Dihydrolipoyllysine-residue acetyltransferase component of acetoincleaving system. (398 aa) |
| | GYO_1078 | Dihydrolipoamide dehydrogenase. (458 aa) |
| | GYO_1079 | Transcriptional regulator. (617 aa) |
| | GYO_1232 | Citrate synthase 1; Belongs to the citrate synthase family. (366 aa) |
| | GYO_1279 | enoyl-CoA hydratase. (255 aa) |
| | fabH | 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (325 aa) |
| | GYO_1323 | YhfJ. (331 aa) |
| | GYO_1325 | long-chain-fatty-acid--CoA ligase. (529 aa) |
| | GYO_1333 | Protein YhdH. (330 aa) |
| | GYO_1337 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (364 aa) |
| | GYO_1338 | acyl-CoA synthase. (481 aa) |
| | fabH-2 | 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (312 aa) |
| | fabF | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (413 aa) |
| | GYO_1477 | Enoyl-[acyl-carrier-protein] reductase. (258 aa) |
| | GYO_1528 | Cytochrome P450. (396 aa) |
| | GYO_1529 | YjiC. (392 aa) |
| | GYO_1730 | 3-hydroxyisobutyrate dehydrogenase. (288 aa) |
| | GYO_1742 | 2,4-dienoyl-CoA reductase. (254 aa) |
| | pdhA | Pyruvate dehydrogenase E1 component, alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). (371 aa) |
| | GYO_1798 | Pyruvate dehydrogenase E1 component subunit beta. (325 aa) |
| | GYO_1799 | Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex. (442 aa) |
| | GYO_1800 | Dihydrolipoamide dehydrogenase. (470 aa) |
| | glsA-2 | Glutaminase 2; Belongs to the glutaminase family. (309 aa) |
| | pyc | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1148 aa) |
| | GYO_1940 | Malonyl CoA-acyl carrier protein transacylase. (317 aa) |
| | fabG | 3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa) |
| | acpP | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (77 aa) |
| | sucC | succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (385 aa) |
| | sucD | succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (300 aa) |
| | GYO_2042 | Short chain dehydrogenase. (242 aa) |
| | GYO_2049 | Penicillin-binding protein 4*. (391 aa) |
| | GYO_2064 | Polyketide synthesis protein. (225 aa) |
| | GYO_2065 | Malonyl CoA-acyl carrier protein transacylase. (288 aa) |
| | GYO_2066 | Polyketide synthesis protein. (324 aa) |
| | GYO_2067 | Malonyl CoA-acyl carrier protein transacylase, putative. (760 aa) |
| | GYO_2068 | Conserved domain protein. (82 aa) |
| | GYO_2069 | Putative polyketide beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (415 aa) |
| | GYO_2070 | TaC protein. (420 aa) |
| | GYO_2071 | Conserved hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa) |
| | GYO_2072 | Conserved hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family. (249 aa) |
| | GYO_2073 | KR domain family. (5047 aa) |
| | GYO_2074 | KR domain family. (4563 aa) |
| | GYO_2075 | KR domain family; Overlaps another CDS with the same product name. (4260 aa) |
| | GYO_2076 | KR domain family; Overlaps another CDS with the same product name. (5507 aa) |
| | GYO_2077 | Methyltransferase domain family. (2543 aa) |
| | GYO_2078 | Cytochrome P450. (405 aa) |
| | GYO_2105 | HTH-type transcriptional regulator GlnR. (135 aa) |
| | glnA | Glutamine synthetase. (444 aa) |
| | acnA | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (909 aa) |
| | yngE | Putative biotin-dependent carboxyl transferase YngE. (509 aa) |
| | yngF | Putative 3-hydroxybutyryl-CoA dehydratase YngF; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa) |
| | yngG | Putative hydroxymethylglutaryl-CoA lyase YngG. (300 aa) |
| | yngXX | Putative glutaconyl-CoA decarboxylase activity YngXX. (73 aa) |
| | yngH | Putative acetyl-CoA and biotin carboxylase YngH. (442 aa) |
| | yngI | YngI. (549 aa) |
| | yngJ | Putative acyl-CoA dehydrogenase, short-chain specific, YngJ. (380 aa) |
| | GYO_2200 | Amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. (2611 aa) |
| | GYO_2201 | Amino acid adenylation domain protein. (5365 aa) |
| | GYO_2202 | Aminotransferase, class III family. (3971 aa) |
| | GYO_2203 | Malonyl CoA-acyl carrier protein transacylase. (399 aa) |
| | gltB | Glutamate synthase [NADPH] small chain. (493 aa) |
| | gltA | Glutamate synthase [NADPH] large chain. (1520 aa) |
| | GYO_2223 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (238 aa) |
| | oxdD | Spore coat protein and oxalate decarboxylase OxdD. (390 aa) |
| | GYO_2300 | Amine oxidase, flavin-containing. (474 aa) |
| | GYO_2333 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (495 aa) |
| | sucB | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (417 aa) |
| | sucA | 2-oxoglutarate dehydrogenase, E1 component; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2). (944 aa) |
| | GYO_2344 | Glycosyl Transferase Family 1. (405 aa) |
| | GYO_2374 | YodN. (226 aa) |
| | GYO_2376 | YokU. (92 aa) |
| | GYO_2377 | L-lysine 2,3-aminomutase. (471 aa) |
| | GYO_2378 | YodP. (275 aa) |
| | GYO_2379 | Acetylornithine deacetylase. (434 aa) |
| | GYO_2380 | 3-oxoadipate CoA-transferase subunit B. (217 aa) |
| | GYO_2381 | Acetate CoA-transferase alpha subunit. (229 aa) |
| | GYO_2382 | YokM; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa) |
| | gudB | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (424 aa) |
| | GYO_2648 | Lipoamide acyltransferase component of branched-chain alpha-keto aciddehydrogenase complex. (427 aa) |
| | GYO_2649 | 2-oxoisovalerate dehydrogenase beta subunit. (327 aa) |
| | GYO_2650 | 2-oxoisovalerate dehydrogenase alpha subunit. (330 aa) |
| | GYO_2651 | Dihydrolipoamide dehydrogenase. (474 aa) |
| | buk | Butyrate kinase; Belongs to the acetokinase family. (363 aa) |
| | GYO_2653 | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (364 aa) |
| | ptb | Phosphate butyryltransferase. (299 aa) |
| | GYO_2655 | Sigma-54 interaction domain family. (691 aa) |
| | yqiQ | Putative methylisocitrate lyase YqiQ; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. (301 aa) |
| | mmgE | 2-methylcitrate dehydratase. (472 aa) |
| | mmgD | Citrate synthase 3; Belongs to the citrate synthase family. (372 aa) |
| | mmgC | acyl-CoA dehydrogenase. (379 aa) |
| | mmgB | 3-hydroxybutyryl-CoA dehydrogenase. (287 aa) |
| | mmgA | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa) |
| | accC | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (450 aa) |
| | accB | acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (160 aa) |
| | lipM | YqhM; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation. (278 aa) |
| | gcvPB | Glycine cleavage system P-protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily. (488 aa) |
| | gcvPA | Glycine cleavage system P-protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (448 aa) |
| | gcvT | Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine. (362 aa) |
| | nucB | Sporulation-specific extracellular nuclease. (136 aa) |
| | adhB | S-(hydroxymethyl)glutathione dehydrogenase. (378 aa) |
| | GYO_2935 | Alcohol dehydrogenase, zinc-containing. (349 aa) |
| | GYO_3089 | Succinate dehydrogenase iron-sulfur subunit. (253 aa) |
| | GYO_3090 | Succinate dehydrogenase flavoprotein subunit. (586 aa) |
| | GYO_3091 | Succinate dehydrogenase cytochrome b558 subunit. (202 aa) |
| | GYO_3099 | Electron transfer flavoprotein alpha-subunit. (325 aa) |
| | GYO_3100 | Electron transfer flavoprotein beta-subunit. (257 aa) |
| | GYO_3101 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa) |
| | GYO_3102 | YsiA. (194 aa) |
| | GYO_3103 | long-chain-fatty-acid--CoA ligase. (559 aa) |
| | mdh | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (312 aa) |
| | icd | Isocitrate dehydrogenase, NADP-dependent. (423 aa) |
| | GYO_3166 | Citrate synthase 2; Belongs to the citrate synthase family. (372 aa) |
| | accA | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (325 aa) |
| | accD | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (290 aa) |
| | GYO_3175 | YtsJ. (410 aa) |
| | GYO_3185 | Short chain dehydrogenase. (255 aa) |
| | ackA | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (395 aa) |
| | GYO_3202 | YtcI. (529 aa) |
| | GYO_3216 | AMP-binding enzyme, putative. (572 aa) |
| | pckA | Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (527 aa) |
| | GYO_3486 | Conserved domain protein. (69 aa) |
| | GYO_3487 | Amino acid adenylation domain protein. (2379 aa) |
| | GYO_3488 | Isochorismatase. (311 aa) |
| | lipA | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (298 aa) |
| | gcvH | Glycine cleavage system H protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family. (127 aa) |
| | GYO_3584 | YusJ. (594 aa) |
| | GYO_3585 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa) |
| | GYO_3586 | 3-hydroxyacyl-CoA dehydrogenase, C- domain family. (789 aa) |
| | GYO_3594 | 3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa) |
| | fumC | Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (462 aa) |
| | GYO_3675 | 3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (264 aa) |
| | fabZ | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (141 aa) |
| | GYO_4096 | acyl-CoA dehydrogenase. (379 aa) |
| | GYO_4097 | Cysteine-rich domain protein. (705 aa) |
| | lipL | YwfL; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family. (281 aa) |
| | pta | Phosphate acetyltransferase. (323 aa) |
| | rocG | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (424 aa) |
| | GYO_4249 | Hypothetical protein. (37 aa) |
| | GYO_4250 | Conserved domain protein. (49 aa) |
| | dltA | D-alanine-activating enzyme; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to the ATP-dependent AMP [...] (504 aa) |
| | GYO_4252 | Protein DltB; Could be involved in the transport of activated D-alanine through the membrane. (395 aa) |
| | dltC | D-alanyl carrier protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. (78 aa) |
| | GYO_4254 | Protein DltD. (392 aa) |
| | GYO_4255 | Protein DltE; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa) |
| | GYO_4287 | Benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (485 aa) |
| | yxjF | Putative D-beta-hydroxybutyrate dehydrogenase. (257 aa) |
| | scoB | Putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. (218 aa) |
| | scoA | Putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. (238 aa) |
| | yxjC | Sporulation membrane protein YxjC. (472 aa) |
| | GYO_4393 | Putative aldehyde dehydrogenase AldX; Belongs to the aldehyde dehydrogenase family. (445 aa) |
