STRINGSTRING
GYO_0563 GYO_0563 GYO_0564 GYO_0564 srfAD srfAD GYO_0570 GYO_0570 GYO_2064 GYO_2064 GYO_2065 GYO_2065 GYO_2066 GYO_2066 GYO_2067 GYO_2067 GYO_2068 GYO_2068 GYO_2069 GYO_2069 GYO_2070 GYO_2070 GYO_2071 GYO_2071 GYO_2072 GYO_2072 GYO_2073 GYO_2073 GYO_2074 GYO_2074 GYO_2075 GYO_2075 GYO_2076 GYO_2076 GYO_2077 GYO_2077 GYO_2078 GYO_2078 GYO_2200 GYO_2200 GYO_2201 GYO_2201 GYO_2202 GYO_2202 GYO_3486 GYO_3486 GYO_3487 GYO_3487 GYO_3488 GYO_3488
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GYO_0563Putative surfactin synthethase subunit 2 SrfAB. (3583 aa)
GYO_0564Putative surfactin synthethase subunit 3 SrfAC. (1275 aa)
srfADSurfactin synthetase thioesterase subunit SrfAD. (242 aa)
GYO_05704'-phosphopantetheinyl transferase sfp; Belongs to the P-Pant transferase superfamily. (224 aa)
GYO_2064Polyketide synthesis protein. (225 aa)
GYO_2065Malonyl CoA-acyl carrier protein transacylase. (288 aa)
GYO_2066Polyketide synthesis protein. (324 aa)
GYO_2067Malonyl CoA-acyl carrier protein transacylase, putative. (760 aa)
GYO_2068Conserved domain protein. (82 aa)
GYO_2069Putative polyketide beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (415 aa)
GYO_2070TaC protein. (420 aa)
GYO_2071Conserved hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa)
GYO_2072Conserved hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family. (249 aa)
GYO_2073KR domain family. (5047 aa)
GYO_2074KR domain family. (4563 aa)
GYO_2075KR domain family; Overlaps another CDS with the same product name. (4260 aa)
GYO_2076KR domain family; Overlaps another CDS with the same product name. (5507 aa)
GYO_2077Methyltransferase domain family. (2543 aa)
GYO_2078Cytochrome P450. (405 aa)
GYO_2200Amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family. (2611 aa)
GYO_2201Amino acid adenylation domain protein. (5365 aa)
GYO_2202Aminotransferase, class III family. (3971 aa)
GYO_3486Conserved domain protein. (69 aa)
GYO_3487Amino acid adenylation domain protein. (2379 aa)
GYO_3488Isochorismatase. (311 aa)
Your Current Organism:
Bacillus subtilis spizizenii
NCBI taxonomy Id: 1052585
Other names: B. subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii str. TU-B-10, Bacillus subtilis subsp. spizizenii strain TU-B-10
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