STRINGSTRING
GYO_0676 GYO_0676 GYO_0847 GYO_0847 GYO_1140 GYO_1140 perR perR katA katA GYO_1245 GYO_1245 GYO_1717 GYO_1717 ykuU ykuU GYO_1758 GYO_1758 GYO_1801 GYO_1801 GYO_2334 GYO_2334 GYO_2335 GYO_2335 sodC sodC msrB msrB msrA msrA GYO_2767 GYO_2767 GYO_2936 GYO_2936 trx trx ytgI ytgI GYO_3602 GYO_3602 trxB trxB GYO_4185 GYO_4185 katX katX GYO_4310 GYO_4310 ahpC ahpC ahpF ahpF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GYO_0676YdbP; Belongs to the thioredoxin family. (106 aa)
GYO_0847Manganese catalase. (284 aa)
GYO_1140YgaF. (157 aa)
perRPerR peroxide-sensing regulator; Belongs to the Fur family. (145 aa)
katACatalase; Belongs to the catalase family. (483 aa)
GYO_1245NAD-dependent epimerase/dehydratase. (299 aa)
GYO_1717Cadmium-translocating P-type ATPase. (637 aa)
ykuUPeroxiredoxin. (180 aa)
GYO_1758Thiol-disulfide oxidoreductase YkuV. (152 aa)
GYO_1801Pal-related lipoprotein. (124 aa)
GYO_2334Squalene/oxidosqualene cyclases subfamily. (632 aa)
GYO_2335Putative superoxide dismutase. (281 aa)
sodCCopper/zinc superoxide dismutase. (196 aa)
msrBmethionine-R-sulfoxide reductase. (144 aa)
msrAmethionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (177 aa)
GYO_2767Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (202 aa)
GYO_2936Intracellular protease 1. (169 aa)
trxThioredoxin; Belongs to the thioredoxin family. (104 aa)
ytgIPutative thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. (167 aa)
GYO_3602Metalloregulation DNA-binding stress protein; Belongs to the Dps family. (153 aa)
trxBThioredoxin-disulfide reductase. (316 aa)
GYO_4185Aldehyde dehydrogenase 3B1. (199 aa)
katXCatalase; Belongs to the catalase family. (547 aa)
GYO_4310Catalase-related family; Serves to protect cells from the toxic effects of hydrogen peroxide. (686 aa)
ahpCPeroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa)
ahpFAlkyl hydroperoxide reductase, F subunit. (509 aa)
Your Current Organism:
Bacillus subtilis spizizenii
NCBI taxonomy Id: 1052585
Other names: B. subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii str. TU-B-10, Bacillus subtilis subsp. spizizenii strain TU-B-10
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