STRINGSTRING
GYO_3124 GYO_3124 GYO_0958 GYO_0958 treP treP GYO_3277 GYO_3277 GYO_3559 GYO_3559 GYO_3746 GYO_3746 GYO_3747 GYO_3747 GYO_3793 GYO_3793 GYO_3794 GYO_3794
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GYO_3124L-arabinose transport system permease protein AraP. (313 aa)
GYO_0958Inner membrane protein. (301 aa)
trePPts system, trehalose-specific iibc component. (470 aa)
GYO_3277Sugar transport protein. (303 aa)
GYO_3559ABC sugar transporter, inner membrane subunit. (292 aa)
GYO_3746YvfM. (283 aa)
GYO_3747YvfL. (418 aa)
GYO_3793YvdI. (278 aa)
GYO_3794YvdH. (435 aa)
Your Current Organism:
Bacillus subtilis spizizenii
NCBI taxonomy Id: 1052585
Other names: B. subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii str. TU-B-10, Bacillus subtilis subsp. spizizenii strain TU-B-10
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