STRINGSTRING
GYO_3325 GYO_3325 GYO_1835 GYO_1835 GYO_3502 GYO_3502 qoxD qoxD qoxC qoxC cydB cydB GYO_4277 GYO_4277
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GYO_3325YthA. (443 aa)
GYO_1835cytoChrome c oxidase subunit 3. (207 aa)
GYO_3502Pyridine nucleotide-disulfide oxidoreductase family protein. (404 aa)
qoxDCytochrome aa3 quinol oxidase, subunit IV. (124 aa)
qoxCCytochrome aa3 quinol oxidase, subunit III. (204 aa)
cydBCytochrome D ubiquinol oxidase, subunit II. (338 aa)
GYO_4277Cytochrome D ubiquinol oxidase subunit 1. (468 aa)
Your Current Organism:
Bacillus subtilis spizizenii
NCBI taxonomy Id: 1052585
Other names: B. subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii str. TU-B-10, Bacillus subtilis subsp. spizizenii strain TU-B-10
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