STRINGSTRING
GYO_0349 GYO_0349 GYO_0402 GYO_0402 glpT glpT GYO_0440 GYO_0440 GYO_0476 GYO_0476 GYO_0477 GYO_0477 GYO_0489 GYO_0489 GYO_3456 GYO_3456 GYO_0502 GYO_0502 GYO_0510 GYO_0510 GYO_0528 GYO_0528 GYO_0658 GYO_0658 dctA dctA GYO_0928 GYO_0928 GYO_1040 GYO_1040 cax cax GYO_1300 GYO_1300 GYO_1504 GYO_1504 GYO_1717 GYO_1717 GYO_1776 GYO_1776 coxB coxB ctaD ctaD GYO_1835 GYO_1835 ctaF ctaF GYO_1914 GYO_1914 fliI fliI GYO_2182 GYO_2182 GYO_2313 GYO_2313 kdgT kdgT GYO_2592 GYO_2592 pstB pstB pstB-2 pstB-2 pnaS pnaS GYO_2887 GYO_2887 GYO_3021 GYO_3021 GYO_3118 GYO_3118 GYO_3388 GYO_3388 cpa cpa GYO_3453 GYO_3453 GYO_3455 GYO_3455 GYO_4405 GYO_4405 GYO_4278 GYO_4278 qoxA qoxA qoxB qoxB qoxC qoxC atpA atpA atpD atpD GYO_3800 GYO_3800 yvfH yvfH GYO_3663 GYO_3663 GYO_3662 GYO_3662 GYO_3654 GYO_3654 metN metN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GYO_0349YbaR. (478 aa)
GYO_0402Sodium-dependent phosphate transporter. (542 aa)
glpTGlycerol-3-phosphate transporter. (444 aa)
GYO_0440Amino acid carrier protein AlsT. (478 aa)
GYO_0476ATP-binding transport protein NatA. (246 aa)
GYO_0477Protein NatB. (386 aa)
GYO_0489Zinc uptake system ATP-binding protein zurA. (231 aa)
GYO_3456Na(+)/H(+) antiporter subunit G. (124 aa)
GYO_0502Glycine betaine transport ATP-binding protein opuAA. (418 aa)
GYO_0510L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (541 aa)
GYO_0528Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (476 aa)
GYO_0658YdbA. (272 aa)
dctAAerobic C4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (421 aa)
GYO_0928Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (492 aa)
GYO_1040YflA. (471 aa)
caxCalcium/proton exchanger; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons. (351 aa)
GYO_1300Protein EcsC. (236 aa)
GYO_1504Phosphotransferase system. (650 aa)
GYO_1717Cadmium-translocating P-type ATPase. (637 aa)
GYO_1776Fructose permease IIC component. (634 aa)
coxBcytoChrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (356 aa)
ctaDCytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (622 aa)
GYO_1835cytoChrome c oxidase subunit 3. (207 aa)
ctaFCytochrome c oxidase, subunit IV. (110 aa)
GYO_1914E1-E2 ATPase subfamily, putative. (890 aa)
fliIFlagellar protein export ATPase FliI. (427 aa)
GYO_2182Amino acid carrier protein AlsT. (465 aa)
GYO_2313YozB. (178 aa)
kdgT2-keto-3-deoxygluconate permease. (330 aa)
GYO_2592na+/H+ antiporter NhaC. (468 aa)
pstBPhosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (242 aa)
pstB-2Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (248 aa)
pnaSNa/Pi-cotransporter II-related protein. (307 aa)
GYO_2887Copper-translocating P-type ATPase. (812 aa)
GYO_3021Sodium:alanine symporter. (484 aa)
GYO_3118Carbon starvation protein CstA, putative. (598 aa)
GYO_3388Cation transport protein, putative. (445 aa)
cpaMonovalent cation:proton antiporter subfamily. (801 aa)
GYO_3453Na(+)/H(+) antiporter subunit D. (496 aa)
GYO_3455Na(+)/H(+) antiporter subunit F. (94 aa)
GYO_4405Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (525 aa)
GYO_4278Citrate/malate transporter. (450 aa)
qoxACytochrome aa3 quinol oxidase, subunit II; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I. (318 aa)
qoxBCytochrome aa3 quinol oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family. (649 aa)
qoxCCytochrome aa3 quinol oxidase, subunit III. (204 aa)
atpAATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (502 aa)
atpDATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (473 aa)
GYO_3800Sulfate permease family protein. (530 aa)
yvfHLactate peamease family; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (563 aa)
GYO_3663Copper-translocating P-type ATPase. (803 aa)
GYO_3662Cadmium-translocating P-type ATPase. (699 aa)
GYO_3654Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (670 aa)
metNYusC; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (341 aa)
Your Current Organism:
Bacillus subtilis spizizenii
NCBI taxonomy Id: 1052585
Other names: B. subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii str. TU-B-10, Bacillus subtilis subsp. spizizenii strain TU-B-10
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