(17 nodes) Sodium ion transmembrane transport network (Bacillus subtilis spizizenii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	GYO_0440	Amino acid carrier protein AlsT. (478 aa)
	GYO_4405	Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (525 aa)
	GYO_3654	Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (670 aa)
	GYO_3456	Na(+)/H(+) antiporter subunit G. (124 aa)
	GYO_3455	Na(+)/H(+) antiporter subunit F. (94 aa)
	GYO_3453	Na(+)/H(+) antiporter subunit D. (496 aa)
	cpa	Monovalent cation:proton antiporter subfamily. (801 aa)
	GYO_3021	Sodium:alanine symporter. (484 aa)
	pnaS	Na/Pi-cotransporter II-related protein. (307 aa)
	GYO_2592	na+/H+ antiporter NhaC. (468 aa)
	GYO_2182	Amino acid carrier protein AlsT. (465 aa)
	GYO_1040	YflA. (471 aa)
	GYO_0928	Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (492 aa)
	GYO_0528	Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (476 aa)
	GYO_0477	Protein NatB. (386 aa)
	GYO_0476	ATP-binding transport protein NatA. (246 aa)
	GYO_0402	Sodium-dependent phosphate transporter. (542 aa)

Your Current Organism:

Bacillus subtilis spizizenii

NCBI taxonomy Id: 1052585
Other names: B. subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii str. TU-B-10, Bacillus subtilis subsp. spizizenii strain TU-B-10

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GYO_0476	GYO_0477	GYO_0476	GYO_0477	ATP-binding transport protein NatA.	Protein NatB.	0.998
GYO_0477	GYO_0476	GYO_0477	GYO_0476	Protein NatB.	ATP-binding transport protein NatA.	0.998
GYO_3453	GYO_3455	GYO_3453	GYO_3455	Na(+)/H(+) antiporter subunit D.	Na(+)/H(+) antiporter subunit F.	0.999
GYO_3453	GYO_3456	GYO_3453	GYO_3456	Na(+)/H(+) antiporter subunit D.	Na(+)/H(+) antiporter subunit G.	0.999
GYO_3453	cpa	GYO_3453	GYO_3450	Na(+)/H(+) antiporter subunit D.	Monovalent cation:proton antiporter subfamily.	0.999
GYO_3455	GYO_3453	GYO_3455	GYO_3453	Na(+)/H(+) antiporter subunit F.	Na(+)/H(+) antiporter subunit D.	0.999
GYO_3455	GYO_3456	GYO_3455	GYO_3456	Na(+)/H(+) antiporter subunit F.	Na(+)/H(+) antiporter subunit G.	0.999
GYO_3455	cpa	GYO_3455	GYO_3450	Na(+)/H(+) antiporter subunit F.	Monovalent cation:proton antiporter subfamily.	0.997
GYO_3456	GYO_3453	GYO_3456	GYO_3453	Na(+)/H(+) antiporter subunit G.	Na(+)/H(+) antiporter subunit D.	0.999
GYO_3456	GYO_3455	GYO_3456	GYO_3455	Na(+)/H(+) antiporter subunit G.	Na(+)/H(+) antiporter subunit F.	0.999
GYO_3456	cpa	GYO_3456	GYO_3450	Na(+)/H(+) antiporter subunit G.	Monovalent cation:proton antiporter subfamily.	0.998
cpa	GYO_3453	GYO_3450	GYO_3453	Monovalent cation:proton antiporter subfamily.	Na(+)/H(+) antiporter subunit D.	0.999
cpa	GYO_3455	GYO_3450	GYO_3455	Monovalent cation:proton antiporter subfamily.	Na(+)/H(+) antiporter subunit F.	0.997
cpa	GYO_3456	GYO_3450	GYO_3456	Monovalent cation:proton antiporter subfamily.	Na(+)/H(+) antiporter subunit G.	0.998

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