STRINGSTRING
urtC urtC GYO_3445 GYO_3445 GYO_3446 GYO_3446 GYO_3954 GYO_3954 urtB urtB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
urtCPutative membrane protein; Belongs to the binding-protein-dependent transport system permease family. (356 aa)
GYO_3445Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family. (348 aa)
GYO_3446Sugar ABC transporter; Belongs to the binding-protein-dependent transport system permease family. (319 aa)
GYO_3954Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. (322 aa)
urtBABC transporter; Belongs to the binding-protein-dependent transport system permease family. (300 aa)
Your Current Organism:
Bacillus subtilis spizizenii
NCBI taxonomy Id: 1052585
Other names: B. subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii TU-B-10, Bacillus subtilis subsp. spizizenii str. TU-B-10, Bacillus subtilis subsp. spizizenii strain TU-B-10
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