Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GYO_2527 | GYO_3569 | GYO_2527 | GYO_3569 | YpdA. | Aminotransferase, class V; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.905 |
| GYO_2527 | trxB | GYO_2527 | GYO_3815 | YpdA. | Thioredoxin-disulfide reductase. | 0.900 |
| GYO_3569 | GYO_2527 | GYO_3569 | GYO_2527 | Aminotransferase, class V; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | YpdA. | 0.905 |
| GYO_3569 | metI | GYO_3569 | GYO_1494 | Aminotransferase, class V; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | Cystathionine gamma-synthase. | 0.900 |
| GYO_3569 | trxB | GYO_3569 | GYO_3815 | Aminotransferase, class V; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | Thioredoxin-disulfide reductase. | 0.911 |
| GYO_4300 | metC | GYO_4300 | GYO_1495 | YxjG. | Cystathionine beta-lyase. | 0.940 |
| GYO_4300 | metE | GYO_4300 | GYO_1639 | YxjG. | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.949 |
| GYO_4300 | metG | GYO_4300 | GYO_0047 | YxjG. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.909 |
| GYO_4300 | metI | GYO_4300 | GYO_1494 | YxjG. | Cystathionine gamma-synthase. | 0.936 |
| GYO_4300 | patB | GYO_4300 | GYO_3432 | YxjG. | Aminotransferase, class II. | 0.901 |
| metC | GYO_4300 | GYO_1495 | GYO_4300 | Cystathionine beta-lyase. | YxjG. | 0.940 |
| metC | metE | GYO_1495 | GYO_1639 | Cystathionine beta-lyase. | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.961 |
| metC | metI | GYO_1495 | GYO_1494 | Cystathionine beta-lyase. | Cystathionine gamma-synthase. | 0.990 |
| metC | patB | GYO_1495 | GYO_3432 | Cystathionine beta-lyase. | Aminotransferase, class II. | 0.936 |
| metE | GYO_4300 | GYO_1639 | GYO_4300 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | YxjG. | 0.949 |
| metE | metC | GYO_1639 | GYO_1495 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | Cystathionine beta-lyase. | 0.961 |
| metE | metG | GYO_1639 | GYO_0047 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.909 |
| metE | metI | GYO_1639 | GYO_1494 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | Cystathionine gamma-synthase. | 0.960 |
| metE | patB | GYO_1639 | GYO_3432 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | Aminotransferase, class II. | 0.901 |
| metG | GYO_4300 | GYO_0047 | GYO_4300 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | YxjG. | 0.909 |
page 1 of 2