(43 nodes) Proteasome complex network (Cavenderia fasciculata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	psmD8-2	26S proteasome regulatory subunit S14. (262 aa)
	psmB7	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (271 aa)
	DFA_03570	Uncharacterized protein. (904 aa)
	psmD1	26S proteasome regulatory subunit S1; Belongs to the proteasome subunit S1 family. (952 aa)
	psmB3	Proteasome subunit beta type 3. (201 aa)
	ubqB	Ubiquitin/ribosomal protein L40 fusion protein. (138 aa)
	psmA4	Proteasome subunit alpha type. (250 aa)
	psmC2	26S proteasome ATPase 2 subunit; Belongs to the AAA ATPase family. (420 aa)
	psmA5	Proteasome subunit alpha type. (245 aa)
	psmD13	26S proteasome non-ATPase regulatory subunit 13. (378 aa)
	psmA3	Proteasome subunit alpha type. (248 aa)
	psmA7	Proteasome subunit alpha type. (252 aa)
	adrm1-2	Adhesion regulating molecule family protein. (302 aa)
	usp14	Ubiquitin carboxyl-terminal hydrolase. (509 aa)
	psmB5	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (300 aa)
	uch2	Ubiquitin carboxyl-terminal hydrolase. (349 aa)
	ubqD	Ubiquitin. (162 aa)
	psmD4	Type A von Willebrand factor domain-containing protein. (351 aa)
	psmC4	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (411 aa)
	psmE4	Proteasome activator complex subunit 4. (2650 aa)
	psmD14	26S proteasome non-ATPase regulatory subunit 14. (326 aa)
	psmD11	26S proteasome non-ATPase regulatory subunit 11. (974 aa)
	psmB2	Proteasome subunit beta type 2. (159 aa)
	psmA1	Proteasome subunit alpha type. (250 aa)
	psmC1	26S proteasome ATPase 1 subunit; Belongs to the AAA ATPase family. (440 aa)
	DFA_02601	Uncharacterized protein. (552 aa)
	psmA6	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (246 aa)
	psmB6	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (214 aa)
	psmD12	26S proteasome non-ATPase regulatory subunit 12; Belongs to the peptidase A1 family. (1147 aa)
	psmC6	26S protease regulatory subunit S10B; Belongs to the AAA ATPase family. (393 aa)
	psmD2	26S proteasome regulatory subunit S2. (1212 aa)
	DFA_08302	Myb domain-containing protein. (920 aa)
	psmD3	26S proteasome regulatory subunit S3. (494 aa)
	psmB1	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (236 aa)
	psmE3	Proteasome activator complex subunit 3. (229 aa)
	psmD6	26S proteasome non-ATPase regulatory subunit 6. (381 aa)
	ubqJ	Ubiquitin. (380 aa)
	psmA2	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (162 aa)
	DFA_10859	Uncharacterized protein. (68 aa)
	psmB4-2	Proteasome subunit beta; Belongs to the peptidase T1B family. (289 aa)
	psmC3	26S proteasome ATPase 3 subunit; Belongs to the AAA ATPase family. (426 aa)
	psmC5	26S proteasome subunit ATPase 5; Belongs to the AAA ATPase family. (396 aa)
	ublcp1-2	Ubiquitin-like domain-containing CTD phosphatase 1. (940 aa)

Your Current Organism:

Cavenderia fasciculata

NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFA_02601	DFA_03570	F4PZU8	F4PI38	Uncharacterized protein.	Uncharacterized protein.	0.937
DFA_02601	DFA_08302	F4PZU8	F4Q5Q0	Uncharacterized protein.	Myb domain-containing protein.	0.802
DFA_02601	DFA_10859	F4PZU8	F4QBL3	Uncharacterized protein.	Uncharacterized protein.	0.673
DFA_02601	adrm1-2	F4PZU8	F4PQV2	Uncharacterized protein.	Adhesion regulating molecule family protein.	0.990
DFA_02601	psmA1	F4PZU8	F4PYC7	Uncharacterized protein.	Proteasome subunit alpha type.	0.762
DFA_02601	psmA2	F4PZU8	F4QBL2	Uncharacterized protein.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.673
DFA_02601	psmA3	F4PZU8	F4PQC1	Uncharacterized protein.	Proteasome subunit alpha type.	0.659
DFA_02601	psmA4	F4PZU8	F4PLB1	Uncharacterized protein.	Proteasome subunit alpha type.	0.757
DFA_02601	psmA5	F4PZU8	F4PNK1	Uncharacterized protein.	Proteasome subunit alpha type.	0.653
DFA_02601	psmA6	F4PZU8	F4Q2N9	Uncharacterized protein.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.747
DFA_02601	psmA7	F4PZU8	F4PQU7	Uncharacterized protein.	Proteasome subunit alpha type.	0.813
DFA_02601	psmB1	F4PZU8	F4Q6R2	Uncharacterized protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.745
DFA_02601	psmB2	F4PZU8	F4PXQ8	Uncharacterized protein.	Proteasome subunit beta type 2.	0.761
DFA_02601	psmB3	F4PZU8	F4PJR2	Uncharacterized protein.	Proteasome subunit beta type 3.	0.763
DFA_02601	psmB4-2	F4PZU8	F4QCP6	Uncharacterized protein.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.843
DFA_02601	psmB5	F4PZU8	F4PRF6	Uncharacterized protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.624
DFA_02601	psmB6	F4PZU8	F4Q3J1	Uncharacterized protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.781
DFA_02601	psmB7	F4PZU8	F4PHC6	Uncharacterized protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.741
DFA_02601	psmC1	F4PZU8	F4PYH4	Uncharacterized protein.	26S proteasome ATPase 1 subunit; Belongs to the AAA ATPase family.	0.996
DFA_02601	psmC2	F4PZU8	F4PM57	Uncharacterized protein.	26S proteasome ATPase 2 subunit; Belongs to the AAA ATPase family.	0.994