STRINGSTRING
DFA_03010 DFA_03010 DFA_05978 DFA_05978 DFA_06356 DFA_06356 DFA_05538 DFA_05538 uae1 uae1 DFA_02520 DFA_02520
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFA_03010UBA_e1_C domain-containing protein. (1122 aa)
DFA_05978Putative Ligase; Belongs to the ubiquitin-conjugating enzyme family. (165 aa)
DFA_06356Ubiquitin-like domain-containing protein. (101 aa)
DFA_05538Ubiquitin activating enzyme E1. (1067 aa)
uae1Ubiquitin activating enzyme E1; Belongs to the ubiquitin-activating E1 family. (1020 aa)
DFA_02520Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.