STRINGSTRING
DFA_01942 DFA_01942 fip1l1 fip1l1 sympk sympk cpsf2 cpsf2 cpsf1 cpsf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFA_01942WD40 repeat-containing protein. (696 aa)
fip1l1Cleavage and polyadenylation specificity factor FIP1. (405 aa)
sympkSymplekin. (1201 aa)
cpsf2Cleavage and polyadenylation specificity factor subunit 2. (768 aa)
cpsf1CPSF domain-containing protein. (1627 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.