STRINGSTRING
DFA_06075 DFA_06075 DFA_05427 DFA_05427 DFA_00472 DFA_00472 DFA_01482 DFA_01482 DFA_01652 DFA_01652 DFA_04235 DFA_04235 DFA_04164 DFA_04164 DFA_04175 DFA_04175 usp7 usp7 DFA_08114 DFA_08114 DFA_09189 DFA_09189
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFA_06075Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (532 aa)
DFA_05427TYR_PHOSPHATASE_2 domain-containing protein. (235 aa)
DFA_00472Vac14_Fab1_bd domain-containing protein. (1057 aa)
DFA_01482Uncharacterized protein. (290 aa)
DFA_01652Uncharacterized protein. (499 aa)
DFA_04235Uncharacterized protein. (225 aa)
DFA_04164Putative transposase. (1252 aa)
DFA_04175Carbohydrate-binding domain-containing protein. (701 aa)
usp7Meprin and TRAF domain-containing protein; Belongs to the peptidase C19 family. (1165 aa)
DFA_08114Ubiquitin-specific protease 48-like protein; Belongs to the peptidase C19 family. (1056 aa)
DFA_09189Carrier domain-containing protein. (1256 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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