(11 nodes) Mixed, incl. Water channel activity, and Alditol catabolic process network (Cavenderia fasciculata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gefBB	Ras guanine nucleotide exchange factor. (1992 aa)
	DFA_06368	Uncharacterized protein. (834 aa)
	DFA_05322	Uncharacterized protein; Belongs to the FGGY kinase family. (505 aa)
	DFA_00719	Uncharacterized protein. (785 aa)
	DFA_02194	KLRAQ domain-containing protein. (760 aa)
	wacA	Aquaporin-like protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (321 aa)
	DFA_03887	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (299 aa)
	cyb5A	Cytochrome b5 A; Belongs to the cytochrome b5 family. (141 aa)
	dhak	Dihydroxyacetone kinase. (605 aa)
	DFA_11091	Transmembrane protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (517 aa)
	DFA_11246	Bromodomain-containing protein. (1364 aa)

Your Current Organism:

Cavenderia fasciculata

NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFA_00719	DFA_02194	F4PTH2	F4PYE0	Uncharacterized protein.	KLRAQ domain-containing protein.	0.957
DFA_00719	DFA_03887	F4PTH2	F4Q0P2	Uncharacterized protein.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.487
DFA_00719	DFA_05322	F4PTH2	F4PKW8	Uncharacterized protein.	Uncharacterized protein; Belongs to the FGGY kinase family.	0.771
DFA_00719	DFA_06368	F4PTH2	F4PKU7	Uncharacterized protein.	Uncharacterized protein.	0.449
DFA_00719	DFA_11091	F4PTH2	F4QER9	Uncharacterized protein.	Transmembrane protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.487
DFA_00719	DFA_11246	F4PTH2	F4QFN2	Uncharacterized protein.	Bromodomain-containing protein.	0.675
DFA_00719	dhak	F4PTH2	F4QAJ0	Uncharacterized protein.	Dihydroxyacetone kinase.	0.459
DFA_00719	wacA	F4PTH2	F4PZP9	Uncharacterized protein.	Aquaporin-like protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.487
DFA_02194	DFA_00719	F4PYE0	F4PTH2	KLRAQ domain-containing protein.	Uncharacterized protein.	0.957
DFA_03887	DFA_00719	F4Q0P2	F4PTH2	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Uncharacterized protein.	0.487
DFA_03887	DFA_05322	F4Q0P2	F4PKW8	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Uncharacterized protein; Belongs to the FGGY kinase family.	0.675
DFA_03887	DFA_11246	F4Q0P2	F4QFN2	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Bromodomain-containing protein.	0.675
DFA_03887	dhak	F4Q0P2	F4QAJ0	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Dihydroxyacetone kinase.	0.459
DFA_05322	DFA_00719	F4PKW8	F4PTH2	Uncharacterized protein; Belongs to the FGGY kinase family.	Uncharacterized protein.	0.771
DFA_05322	DFA_03887	F4PKW8	F4Q0P2	Uncharacterized protein; Belongs to the FGGY kinase family.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.675
DFA_05322	DFA_11091	F4PKW8	F4QER9	Uncharacterized protein; Belongs to the FGGY kinase family.	Transmembrane protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.675
DFA_05322	dhak	F4PKW8	F4QAJ0	Uncharacterized protein; Belongs to the FGGY kinase family.	Dihydroxyacetone kinase.	0.458
DFA_05322	gefBB	F4PKW8	F4PHR3	Uncharacterized protein; Belongs to the FGGY kinase family.	Ras guanine nucleotide exchange factor.	0.625
DFA_05322	wacA	F4PKW8	F4PZP9	Uncharacterized protein; Belongs to the FGGY kinase family.	Aquaporin-like protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.675
DFA_06368	DFA_00719	F4PKU7	F4PTH2	Uncharacterized protein.	Uncharacterized protein.	0.449