STRINGSTRING
helC helC DFA_03227 DFA_03227 DFA_03432 DFA_03432 DFA_03433 DFA_03433 nup98 nup98 DFA_03631 DFA_03631 ranbp1 ranbp1 DFA_05135 DFA_05135 DFA_04294 DFA_04294 DFA_04304 DFA_04304 DFA_04470 DFA_04470 nup210 nup210 DFA_04550 DFA_04550 DFA_04663 DFA_04663 DFA_04672 DFA_04672 DFA_01060 DFA_01060 nup107 nup107 nup54 nup54 DFA_01365 DFA_01365 DFA_01426 DFA_01426 DFA_00691 DFA_00691 nup93 nup93 DFA_01877 DFA_01877 DFA_04231 DFA_04231 DFA_07355 DFA_07355 DFA_07522 DFA_07522 ranA ranA nup155 nup155 DFA_02521 DFA_02521 DFA_03761 DFA_03761 DFA_03795 DFA_03795 DFA_06639 DFA_06639 rae1 rae1 cypB cypB DFA_08522 DFA_08522 DFA_07769 DFA_07769 DFA_08649 DFA_08649 DFA_08275 DFA_08275 DFA_07604 DFA_07604 xpo5 xpo5 dotA dotA DFA_09972 DFA_09972 xpot xpot nup43 nup43 DFA_10752 DFA_10752 DFA_10901 DFA_10901 DFA_10910 DFA_10910 slbp slbp DFA_12214 DFA_12214 crlC crlC DFA_11964 DFA_11964 DFA_11965 DFA_11965 DFA_11186 DFA_11186 DFA_12028 DFA_12028
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
helCDEAD-box RNA helicase. (460 aa)
DFA_03227WD40 repeat-containing protein. (1179 aa)
DFA_03432Prespore-specific protein. (893 aa)
DFA_03433Prespore-specific protein. (500 aa)
nup98Putative nucleoporin 98. (1859 aa)
DFA_03631WD40-like domain-containing protein. (543 aa)
ranbp1Ran binding protein 1 domain-containing protein. (235 aa)
DFA_05135Importin subunit alpha; Belongs to the importin alpha family. (532 aa)
DFA_04294Importin subunit alpha; Belongs to the importin alpha family. (548 aa)
DFA_04304Putative nucleoporin. (1727 aa)
DFA_04470MADS-box transcription factor. (791 aa)
nup210Nucleoporin. (1946 aa)
DFA_04550Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (251 aa)
DFA_04663Uncharacterized protein. (602 aa)
DFA_04672Uncharacterized protein. (770 aa)
DFA_01060Importin N-terminal domain-containing protein. (930 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (931 aa)
nup54Nucleoporin 54. (465 aa)
DFA_01365Nsp1_C domain-containing protein. (643 aa)
DFA_01426G-protein-coupled receptor family protein. (368 aa)
DFA_00691WD40 repeat-containing protein. (476 aa)
nup93Nuclear pore protein. (839 aa)
DFA_01877SLBP_RNA_bind domain-containing protein. (442 aa)
DFA_04231Uncharacterized protein. (889 aa)
DFA_07355Uncharacterized protein. (3192 aa)
DFA_07522Uncharacterized protein. (471 aa)
ranAGTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (215 aa)
nup155Nucleoporin. (1482 aa)
DFA_02521Nuclear pore protein. (609 aa)
DFA_03761TPR_MLP1_2 domain-containing protein. (1964 aa)
DFA_03795Sec13-like protein; Belongs to the WD repeat SEC13 family. (298 aa)
DFA_06639Uncharacterized protein. (1510 aa)
rae1WD40 repeat-containing protein. (329 aa)
cypBCyclophilin B. (494 aa)
DFA_08522WD40-like domain-containing protein. (1785 aa)
DFA_07769RING-type domain-containing protein. (758 aa)
DFA_08649NTF2 domain-containing protein. (134 aa)
DFA_08275GRIP domain-containing protein. (788 aa)
DFA_07604Uncharacterized protein. (445 aa)
xpo5Armadillo-like helical domain-containing protein. (1143 aa)
dotAUncharacterized protein dotA. (838 aa)
DFA_09972Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (169 aa)
xpotExportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (988 aa)
nup43WD40 repeat-containing protein. (404 aa)
DFA_10752GH16 domain-containing protein. (1093 aa)
DFA_10901Karyopherin beta 1 isoform 4. (827 aa)
DFA_10910Importin N-terminal domain-containing protein. (979 aa)
slbpHistone RNA hairpin-binding protein. (301 aa)
DFA_12214Uncharacterized protein. (248 aa)
crlCcAMP receptor-like protein. (178 aa)
DFA_11964Uncharacterized protein. (757 aa)
DFA_11965Uncharacterized protein. (710 aa)
DFA_11186Uncharacterized protein. (2044 aa)
DFA_12028Importin subunit alpha; Belongs to the importin alpha family. (511 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.