STRINGSTRING
DFA_02752 DFA_02752 rabG1 rabG1 DFA_01169 DFA_01169 DFA_07185 DFA_07185 DFA_06953 DFA_06953 DFA_04205 DFA_04205 DFA_08327 DFA_08327 DFA_09527 DFA_09527 DFA_09929 DFA_09929 rab1C rab1C DFA_09808 DFA_09808 rab1A rab1A DFA_10894 DFA_10894 DFA_11855 DFA_11855 DFA_11917 DFA_11917
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFA_02752Sulfate transporter. (1019 aa)
rabG1Rab GTPase. (172 aa)
DFA_01169Sulfate transporter. (875 aa)
DFA_07185TYR_PHOSPHATASE_2 domain-containing protein. (313 aa)
DFA_06953Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)
DFA_04205Putative tyrosine phosphatase family protein. (164 aa)
DFA_08327Uncharacterized protein. (938 aa)
DFA_09527STAS domain-containing protein. (880 aa)
DFA_09929RNA recognition motif-containing protein RRM. (613 aa)
rab1CRab GTPase. (199 aa)
DFA_09808Metallophos domain-containing protein. (280 aa)
rab1ARab GTPase. (202 aa)
DFA_10894Uncharacterized protein. (458 aa)
DFA_11855Phosphoglycerate/bisphosphoglycerate mutase. (660 aa)
DFA_11917Ankyrin repeat-containing protein. (1011 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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