STRINGSTRING
DFA_04533 DFA_04533 atr1 atr1 DFA_05401 DFA_05401 ku80 ku80 dclre1 dclre1 DFA_11413 DFA_11413 DFA_11230 DFA_11230 ku70 ku70 DFA_01309 DFA_01309 DFA_07258 DFA_07258 rad50 rad50 pif1 pif1 DFA_08738 DFA_08738 DFA_10799 DFA_10799 mre11 mre11 DFA_10939 DFA_10939 dnapkcs dnapkcs DFA_04646 DFA_04646
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFA_04533Uncharacterized protein; Belongs to the CGI121/TPRKB family. (185 aa)
atr1Protein kinase; Belongs to the PI3/PI4-kinase family. (2763 aa)
DFA_05401Putative DNA repair protein. (476 aa)
ku80ATP-dependent DNA helicase. (756 aa)
dclre1DNA repair metallo-beta-lactamase domain-containing protein. (922 aa)
DFA_11413DNA-dependent protein kinase subunit. (877 aa)
DFA_11230ATP-dependent DNA helicase; Belongs to the helicase family. (1975 aa)
ku70ATP-dependent DNA helicase. (825 aa)
DFA_01309ATP-dependent DNA helicase; Belongs to the helicase family. (1554 aa)
DFA_07258ATP-dependent DNA helicase; Belongs to the helicase family. (1927 aa)
rad50DNA recombination/repair protein. (1306 aa)
pif1ATP-dependent DNA helicase; Belongs to the helicase family. (673 aa)
DFA_08738Rif1_N domain-containing protein. (1093 aa)
DFA_10799Telomere length regulation protein. (851 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (715 aa)
DFA_10939Uncharacterized protein. (1420 aa)
dnapkcsDNA-dependent protein kinase subunit; Belongs to the PI3/PI4-kinase family. (3111 aa)
DFA_04646HD domain-containing protein. (261 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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