7 items (Cavenderia fasciculata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	erf1	Eukaryotic translation termination factor 1. (622 aa)
	DFA_01364	eRF1_1 domain-containing protein. (476 aa)
	eRF3	Eukaryotic release factor 3. (558 aa)
	prfB	Class I peptide chain release factor. (425 aa)
	DFA_03055	RF_PROK_I domain-containing protein. (218 aa)
	DFA_07834	Uncharacterized protein. (176 aa)
	prfA	Peptide chain release factor 1. (530 aa)

Your Current Organism:

Cavenderia fasciculata

NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFA_01364	eRF3	F4PSE8	F4QC93	eRF1_1 domain-containing protein.	Eukaryotic release factor 3.	0.981
DFA_01364	erf1	F4PSE8	F4Q2P7	eRF1_1 domain-containing protein.	Eukaryotic translation termination factor 1.	0.901
DFA_03055	prfA	F4PGH6	F4PZL9	RF_PROK_I domain-containing protein.	Peptide chain release factor 1.	0.627
DFA_03055	prfB	F4PGH6	F4Q6K1	RF_PROK_I domain-containing protein.	Class I peptide chain release factor.	0.627
DFA_07834	prfA	F4Q3N9	F4PZL9	Uncharacterized protein.	Peptide chain release factor 1.	0.627
DFA_07834	prfB	F4Q3N9	F4Q6K1	Uncharacterized protein.	Class I peptide chain release factor.	0.627
eRF3	DFA_01364	F4QC93	F4PSE8	Eukaryotic release factor 3.	eRF1_1 domain-containing protein.	0.981
eRF3	erf1	F4QC93	F4Q2P7	Eukaryotic release factor 3.	Eukaryotic translation termination factor 1.	0.981
erf1	DFA_01364	F4Q2P7	F4PSE8	Eukaryotic translation termination factor 1.	eRF1_1 domain-containing protein.	0.901
erf1	eRF3	F4Q2P7	F4QC93	Eukaryotic translation termination factor 1.	Eukaryotic release factor 3.	0.981
prfA	DFA_03055	F4PZL9	F4PGH6	Peptide chain release factor 1.	RF_PROK_I domain-containing protein.	0.627
prfA	DFA_07834	F4PZL9	F4Q3N9	Peptide chain release factor 1.	Uncharacterized protein.	0.627
prfB	DFA_03055	F4Q6K1	F4PGH6	Class I peptide chain release factor.	RF_PROK_I domain-containing protein.	0.627
prfB	DFA_07834	F4Q6K1	F4Q3N9	Class I peptide chain release factor.	Uncharacterized protein.	0.627