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| | DFA_11743 | Exosome complex exonuclease rrp41. (244 aa) |
| | DFA_03024 | Uncharacterized protein. (1023 aa) |
| | prpf38b | Putative U4/U6.U5 small nuclear ribonucleoparticle-associated protein. (377 aa) |
| | DFA_03161 | CwfJ family protein. (906 aa) |
| | cdc40 | WD40 repeat-containing protein. (495 aa) |
| | upf2 | Eukaryotic initiation factor 4 gamma. (1387 aa) |
| | ddx17 | Putative RNA helicase. (806 aa) |
| | pabpc1B | RNA-binding region RNP-1 domain-containing protein. (748 aa) |
| | pus1 | tRNA pseudouridylate synthase. (542 aa) |
| | DFA_03302 | G-patch domain-containing protein. (1136 aa) |
| | snrpC | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (149 aa) |
| | DFA_03323 | Uncharacterized protein. (589 aa) |
| | DFA_03384 | RNA-binding region RNP-1 domain-containing protein. (297 aa) |
| | dhx8 | DEAD/DEAH box helicase. (1152 aa) |
| | rpb9 | RNA polymerase II core subunit. (108 aa) |
| | DFA_03575 | mRNA cap 0 methyltransferase domain-containing protein. (1343 aa) |
| | DFA_03585 | C3H1-type domain-containing protein. (1749 aa) |
| | sky1 | Uncharacterized protein sky1. (316 aa) |
| | thoc6 | WD40 repeat-containing protein. (431 aa) |
| | lsm4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (162 aa) |
| | dus3l | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. (699 aa) |
| | ncbp2 | Nuclear cap-binding protein subunit 2. (200 aa) |
| | isy1 | ISY1-like protein. (232 aa) |
| | DFA_06390 | Uncharacterized protein. (654 aa) |
| | DFA_06435 | DUF1777 family protein. (330 aa) |
| | DFA_06543 | RNA-binding region RNP-1 domain-containing protein. (280 aa) |
| | DFA_06595 | SART-1 family protein. (678 aa) |
| | DFA_05992 | Hypothetical ribonuclease II domain containing protein; Belongs to the RNR ribonuclease family. (1193 aa) |
| | DFA_06036 | WD_REPEATS_REGION domain-containing protein. (425 aa) |
| | DFA_06065 | Uncharacterized protein. (1151 aa) |
| | prp40 | WW domain-containing protein. (607 aa) |
| | DFA_06092 | Exosome complex exonuclease RRP4. (379 aa) |
| | DFA_06236 | Putative CCR4-NOT complex subunit 1. (2350 aa) |
| | DFA_06238 | J domain-containing protein. (319 aa) |
| | DFA_06297 | RNase_PH domain-containing protein. (329 aa) |
| | DFA_05314 | RRM domain-containing protein. (527 aa) |
| | DFA_05394 | D111/G-patch domain-containing protein. (776 aa) |
| | DFA_05424 | Uncharacterized protein. (291 aa) |
| | slu7 | Putative RNA splicing factor. (558 aa) |
| | snwA | Nuclear receptor coactivator NC0A-62. (1243 aa) |
| | u2af1 | RNA-binding region RNP-1 domain-containing protein. (447 aa) |
| | DFA_05680 | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (203 aa) |
| | DFA_04838 | Tetratricopeptide-like helical domain-containing protein. (1670 aa) |
| | DFA_05698 | mRNA cap 0 methyltransferase domain-containing protein. (325 aa) |
| | cwc15-2 | Putative pre-mRNA-splicing factor CWC15. (293 aa) |
| | DFA_05820 | RNase_PH domain-containing protein. (307 aa) |
| | DFA_05842 | RNA-binding region RNP-1 domain-containing protein. (404 aa) |
| | DFA_05149 | RNA recognition motif-containing protein RRM. (119 aa) |
| | phf5a | PHD finger-like domain-containing protein 5A. (110 aa) |
| | DFA_05199 | Thioredoxin domain-containing protein. (730 aa) |
| | tra2 | RNA-binding region RNP-1 domain-containing protein. (304 aa) |
| | DFA_05267 | THO2 protein. (493 aa) |
| | thoc2 | Putative THO2 protein. (1181 aa) |
| | DFA_05286 | Uncharacterized protein. (395 aa) |
| | strap | WD40 repeat-containing protein. (334 aa) |
| | uap56 | DEAD/DEAH box helicase. (426 aa) |
| | DFA_04271 | Uncharacterized protein. (826 aa) |
| | aqr | Intron-binding protein. (1488 aa) |
| | DFA_04343 | TPR_REGION domain-containing protein. (799 aa) |
| | lsm2 | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (99 aa) |
| | prpf3 | U4/U6 small nuclear ribonucleoprotein. (877 aa) |
| | prp18 | Putative RNA splicing factor. (348 aa) |
| | prp19 | WD40 repeat-containing protein. (509 aa) |
| | ddx20 | Putative RNA helicase. (850 aa) |
| | DFA_04693 | Prespore-specific protein. (535 aa) |
| | gemin5 | Component of gems 5. (1124 aa) |
| | DFA_04708 | Uncharacterized protein. (78 aa) |
| | DFA_01040 | RRM domain-containing protein. (428 aa) |
| | smg1 | Protein kinase; Belongs to the PI3/PI4-kinase family. (1938 aa) |
| | DFA_01081 | Uncharacterized protein. (850 aa) |
| | pabpn1 | Polyadenylate-binding protein 2. (243 aa) |
| | DFA_01942 | WD40 repeat-containing protein. (696 aa) |
| | DFA_01091 | C2H2-type zinc finger-containing protein. (888 aa) |
| | DFA_01113 | NOT2/NOT3/NOT5 family protein. (774 aa) |
| | prpf4 | WD40 repeat-containing protein. (502 aa) |
| | DFA_01973 | Multicopy Suppressor of STA10-11; Mss11p. (888 aa) |
| | DFA_01983 | PseudoU_synth_1 domain-containing protein. (604 aa) |
| | DFA_01226 | Matrin-type domain-containing protein. (352 aa) |
| | DFA_01236 | GC-rich sequence DNA-binding factor-like protein. (920 aa) |
| | DFA_01241 | Uncharacterized protein. (529 aa) |
| | sf3b5 | Splicing factor subunit; Belongs to the SF3B5 family. (96 aa) |
| | DFA_00430 | Uncharacterized protein. (505 aa) |
| | clp1 | Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (431 aa) |
| | DFA_01294 | BTP domain-containing protein. (368 aa) |
| | prpf4B | Uncharacterized protein prpf4B. (870 aa) |
| | pus3 | tRNA pseudouridylate synthase. (510 aa) |
| | DFA_00554 | CPSF_A domain-containing protein. (1355 aa) |
| | irlE | Uncharacterized protein irlE. (916 aa) |
| | DFA_01498 | RNA-binding region RNP-1 domain-containing protein. (370 aa) |
| | snrpG | Small nuclear ribonucleoprotein G. (125 aa) |
| | snrp70 | U1 small nuclear ribonucleoprotein 70 kDa protein. (433 aa) |
| | rpb4 | DNA-directed RNA polymerase II subunit 4. (138 aa) |
| | pan2 | WD40-like domain-containing protein. (1093 aa) |
| | dhx16 | DEAD/DEAH box helicase. (1110 aa) |
| | bud31 | Putative RNA splicing factor. (160 aa) |
| | DFA_01579 | CMP/dCMP deaminase. (276 aa) |
| | DFA_00767 | Uncharacterized protein. (1597 aa) |
| | nola4 | Pseudouridine synthase family protein. (554 aa) |
| | DFA_00806 | RNA recognition motif-containing protein. (454 aa) |
| | irlD | Uncharacterized protein irlD. (1159 aa) |
| | sf3b2 | PSP proline-rich domain-containing protein. (485 aa) |
| | snrpD1 | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (185 aa) |
| | sf1 | Uncharacterized protein sf1. (486 aa) |
| | ctnnbl1 | Armadillo-like helical domain-containing protein. (582 aa) |
| | rpa12 | RNA polymerase I subunit. (264 aa) |
| | DFA_01753 | Poly [ADP-ribose] polymerase. (1780 aa) |
| | DFA_01769 | Smg4_UPF3 domain-containing protein. (206 aa) |
| | spt4 | Transcription initiation factor Spt4. (131 aa) |
| | DFA_01810 | DUF2439 domain-containing protein. (396 aa) |
| | DFA_01811 | zf-GRF domain-containing protein. (702 aa) |
| | DFA_01812 | Prematurely terminated mRNA decay factor-like protein. (492 aa) |
| | DFA_01818 | SAC3/GANP family protein. (817 aa) |
| | DFA_01010 | G-patch domain-containing protein. (1076 aa) |
| | DFA_01030 | TPR_REGION domain-containing protein. (1594 aa) |
| | lsm3 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa) |
| | DFA_01843 | C2H2-type zinc finger-containing protein. (998 aa) |
| | DFA_01877 | SLBP_RNA_bind domain-containing protein. (442 aa) |
| | cwc2 | Pre-mRNA-splicing factor cwc2. (487 aa) |
| | DFA_07053 | Putative splicing factor. (285 aa) |
| | nhp2l1 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (130 aa) |
| | cdc73 | RNA polymerase II complex component. (452 aa) |
| | mrt4 | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (228 aa) |
| | ecd | SGT1 protein. (732 aa) |
| | DFA_07299 | Uncharacterized protein. (310 aa) |
| | DFA_07315 | Uncharacterized protein. (551 aa) |
| | DFA_07375 | Bromodomain-containing protein. (910 aa) |
| | pabpc1A | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (567 aa) |
| | ubl5 | Ubiquitin-like protein 5. (84 aa) |
| | DFA_06883 | Uncharacterized protein. (547 aa) |
| | DFA_00014 | Uncharacterized protein. (294 aa) |
| | sf3a2 | U1-type zinc finger-containing protein. (276 aa) |
| | cpsf4 | CCCH-type zinc finger-containing protein. (286 aa) |
| | DFA_00053 | Uncharacterized protein. (754 aa) |
| | DFA_00198 | RNA-binding region RNP-1 domain-containing protein. (299 aa) |
| | DFA_00203 | Debranching enzyme. (496 aa) |
| | DFA_00267 | PseudoU_synth_1 domain-containing protein. (568 aa) |
| | papA | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (803 aa) |
| | DFA_02210 | NOT2/NOT3/NOT5 family protein. (530 aa) |
| | smu1 | WD40 repeat-containing protein. (600 aa) |
| | ascc3l | DEAD/DEAH box helicase. (2224 aa) |
| | sf3b1 | HEAT repeat-containing protein. (1028 aa) |
| | DFA_02503 | Uncharacterized protein. (716 aa) |
| | DFA_02550 | Uncharacterized protein. (1422 aa) |
| | DFA_02642 | SWAP/Surp domain-containing protein. (284 aa) |
| | prpf38a | Putative U4/U6.U5 small nuclear ribonucleoparticle-associated protein. (309 aa) |
| | sf3a3 | C2H2-type zinc finger-containing protein. (595 aa) |
| | DFA_02673 | C2H2-type zinc finger-containing protein. (319 aa) |
| | cdc5l | Myb domain-containing protein. (823 aa) |
| | wdr57 | WD40 repeat-containing protein. (361 aa) |
| | pelo | Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (405 aa) |
| | DFA_03832 | Putative G-patch-containing protein. (987 aa) |
| | srrm1 | Putative RNA splicing factor. (534 aa) |
| | DFA_04168 | Uncharacterized protein. (660 aa) |
| | DFA_04210 | XRN_N domain-containing protein. (743 aa) |
| | PAN3 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' e [...] (667 aa) |
| | DFA_03688 | RNA-binding region RNP-1 domain-containing protein. (435 aa) |
| | DFA_03692 | Uncharacterized protein. (1061 aa) |
| | DFA_03703 | RING zinc finger-containing protein. (460 aa) |
| | usp39 | SAP DNA-binding domain-containing protein. (524 aa) |
| | ireA | Uncharacterized protein ireA. (1169 aa) |
| | DFA_06645 | RNA-binding region RNP-1 domain-containing protein. (670 aa) |
| | snrpA1 | Leucine-rich repeat-containing protein. (212 aa) |
| | DFA_07664 | Uncharacterized protein. (1366 aa) |
| | snrpB2 | U2 small nuclear ribonucleoprotein B. (241 aa) |
| | helB1 | Putative RNA helicase. (923 aa) |
| | sf3b3 | CPSF domain-containing protein. (1194 aa) |
| | DFA_08659 | Cir_N domain-containing protein. (539 aa) |
| | spf27 | Spliceosome-associated protein. (242 aa) |
| | lsm7 | LSM domain-containing protein. (106 aa) |
| | lsm6 | LSM domain-containing protein. (95 aa) |
| | DFA_07897 | Cell differentiation family protein. (329 aa) |
| | dhx15 | DEAD/DEAH box helicase. (584 aa) |
| | DFA_08773 | Nop domain-containing protein. (567 aa) |
| | cstf1 | WD40 repeat-containing protein. (432 aa) |
| | DFA_08825 | U5 small nuclear ribonucleoprotein subunit. (394 aa) |
| | DFA_08826 | U5 small nuclear ribonucleoprotein subunit. (136 aa) |
| | helB2 | Putative RNA helicase. (834 aa) |
| | DFA_08862 | CwfJ family protein. (601 aa) |
| | ddx41 | DEAD/DEAH box helicase. (631 aa) |
| | prpf8 | Pre-mRNA processing factor 8. (2335 aa) |
| | DFA_08149 | Nudix hydrolase domain-containing protein. (657 aa) |
| | DFA_08213 | RAI1 domain-containing protein. (387 aa) |
| | exosc10 | 3'-5' exonuclease. (818 aa) |
| | DFA_07599 | RRM domain-containing protein. (903 aa) |
| | DFA_07615 | Pinin_SDK_memA domain-containing protein. (422 aa) |
| | DFA_08425 | Uncharacterized protein. (603 aa) |
| | DFA_09152 | Uncharacterized protein. (711 aa) |
| | ncbp1 | Initiation factor eIF-4 gamma middle domain-containing protein. (522 aa) |
| | DFA_09245 | CAF1 family protein. (405 aa) |
| | fip1l1 | Cleavage and polyadenylation specificity factor FIP1. (405 aa) |
| | DFA_09386 | Initiation factor eIF-4 gamma middle domain-containing protein. (798 aa) |
| | DFA_09411 | Coiled-coil domain-containing protein. (358 aa) |
| | morg1 | WD40 repeat-containing protein. (935 aa) |
| | cstf3 | Cleavage stimulation factor subunit 3. (997 aa) |
| | cpsf3 | Beta-lactamase domain-containing protein. (786 aa) |
| | DFA_09793 | Endonuclease/exonuclease/phosphatase domain-containing protein. (558 aa) |
| | mfap1 | Microfibrillar-associated protein 1-like protein. (461 aa) |
| | sympk | Symplekin. (1201 aa) |
| | DFA_10087 | AAA domain-containing protein. (854 aa) |
| | cpsf2 | Cleavage and polyadenylation specificity factor subunit 2. (768 aa) |
| | cstf2 | RNA-binding region RNP-1 domain-containing protein. (436 aa) |
| | DFA_10271 | DiGeorge syndrome critical region 14-like protein. (430 aa) |
| | snrpD2 | Small nuclear ribonucleoprotein Sm D2. (110 aa) |
| | DFA_10421 | Uncharacterized protein. (358 aa) |
| | DFA_10591 | Ge1_WD40 domain-containing protein. (1190 aa) |
| | DFA_10612 | Uncharacterized protein. (194 aa) |
| | dcp2 | mRNA-decapping enzyme 2. (740 aa) |
| | DFA_09807 | Leucine-rich repeat-containing protein. (506 aa) |
| | lsm1 | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (84 aa) |
| | DFA_10662 | TruB_N domain-containing protein. (330 aa) |
| | plrg1 | WD40 repeat-containing protein. (338 aa) |
| | DFA_10742 | WD_REPEATS_REGION domain-containing protein. (97 aa) |
| | DFA_10831 | Cell differentiation family. (400 aa) |
| | DFA_10856 | Uncharacterized protein. (218 aa) |
| | DFA_10863 | Putative exosome complex exonuclease RRP45. (469 aa) |
| | thoc7 | Uncharacterized protein thoc7. (239 aa) |
| | DFA_10935 | Uncharacterized protein. (282 aa) |
| | stip-1 | D111/G-patch domain-containing protein. (888 aa) |
| | DFA_11272 | RNA-binding region RNP-1 domain-containing protein. (662 aa) |
| | lsm5 | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (98 aa) |
| | slbp | Histone RNA hairpin-binding protein. (301 aa) |
| | DFA_12168 | Uncharacterized protein. (1038 aa) |
| | DFA_11337 | Putative nuclease. (286 aa) |
| | ddx6 | Putative RNA helicase; Belongs to the DEAD box helicase family. (414 aa) |
| | upf1 | Helicase. (1162 aa) |
| | snrpD3 | Small nuclear ribonucleoprotein Sm D3. (170 aa) |
| | CRNKL1 | HAT repeat-containing protein. (669 aa) |
| | snd1 | Nuclease domain-containing protein. (929 aa) |
| | sf3a1 | Ubiquitin domain-containing protein. (673 aa) |
| | bud13 | Uncharacterized protein bud13. (502 aa) |
| | prpf6 | TPR repeat-containing protein. (756 aa) |
| | irlB-2 | Uncharacterized protein irlB-2. (1215 aa) |
| | DFA_11620 | G-patch domain-containing protein. (531 aa) |
| | DFA_11635 | CCCH-type zinc finger-containing protein. (389 aa) |
| | DFA_11640 | RapGAP/RanGAP domain-containing protein. (3032 aa) |
| | DFA_11682 | DEAD/DEAH box helicase. (1279 aa) |
| | DFA_11686 | Uncharacterized protein. (899 aa) |
| | DFA_11700 | RNA-binding region RNP-1 domain-containing protein. (949 aa) |
| | xrn1 | 5'-3' exoribonuclease. (1808 aa) |
| | DFA_11767 | RNA-binding region RNP-1 domain-containing protein. (627 aa) |
| | xrn2 | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1157 aa) |
| | lsm8 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (145 aa) |
| | ddx5 | Putative RNA helicase. (803 aa) |
| | cpsf1 | CPSF domain-containing protein. (1627 aa) |
| | spt6 | Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1633 aa) |
| | pcf11 | ENTH domain-containing protein. (705 aa) |
| | txnl4a | Thioredoxin-like U5 small nuclear ribonucleoprotein. (142 aa) |
| | DFA_11237 | Putative CCR4-NOT complex subunit 10. (929 aa) |
| | xab2 | TPR-like helical domain-containing protein. (1076 aa) |
