(9 nodes) Protein import into peroxisome matrix network (Cavenderia fasciculata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pex14	Transmembrane protein. (760 aa)
	pex4	Putative ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
	pex12	RING zinc finger-containing protein. (372 aa)
	pex5	Tetratricopeptide-like helical domain-containing protein. (622 aa)
	pex1	Peroxisomal biogenesis factor 1. (1159 aa)
	pex13	SH3 domain-containing protein. (870 aa)
	pex6	AAA ATPase domain-containing protein. (1173 aa)
	pex10	RING zinc finger-containing protein. (371 aa)
	pex7	WD40 repeat-containing protein. (336 aa)

Your Current Organism:

Cavenderia fasciculata

NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
pex1	pex10	F4PSY5	F4QAT7	Peroxisomal biogenesis factor 1.	RING zinc finger-containing protein.	0.888
pex1	pex12	F4PSY5	F4PIR8	Peroxisomal biogenesis factor 1.	RING zinc finger-containing protein.	0.908
pex1	pex13	F4PSY5	F4PVE6	Peroxisomal biogenesis factor 1.	SH3 domain-containing protein.	0.932
pex1	pex4	F4PSY5	F4PIQ2	Peroxisomal biogenesis factor 1.	Putative ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.745
pex1	pex5	F4PSY5	F4PM03	Peroxisomal biogenesis factor 1.	Tetratricopeptide-like helical domain-containing protein.	0.929
pex1	pex6	F4PSY5	F4PZN8	Peroxisomal biogenesis factor 1.	AAA ATPase domain-containing protein.	0.999
pex1	pex7	F4PSY5	F4QB66	Peroxisomal biogenesis factor 1.	WD40 repeat-containing protein.	0.810
pex10	pex1	F4QAT7	F4PSY5	RING zinc finger-containing protein.	Peroxisomal biogenesis factor 1.	0.888
pex10	pex12	F4QAT7	F4PIR8	RING zinc finger-containing protein.	RING zinc finger-containing protein.	0.999
pex10	pex13	F4QAT7	F4PVE6	RING zinc finger-containing protein.	SH3 domain-containing protein.	0.970
pex10	pex4	F4QAT7	F4PIQ2	RING zinc finger-containing protein.	Putative ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.799
pex10	pex5	F4QAT7	F4PM03	RING zinc finger-containing protein.	Tetratricopeptide-like helical domain-containing protein.	0.964
pex10	pex6	F4QAT7	F4PZN8	RING zinc finger-containing protein.	AAA ATPase domain-containing protein.	0.873
pex10	pex7	F4QAT7	F4QB66	RING zinc finger-containing protein.	WD40 repeat-containing protein.	0.922
pex12	pex1	F4PIR8	F4PSY5	RING zinc finger-containing protein.	Peroxisomal biogenesis factor 1.	0.908
pex12	pex10	F4PIR8	F4QAT7	RING zinc finger-containing protein.	RING zinc finger-containing protein.	0.999
pex12	pex13	F4PIR8	F4PVE6	RING zinc finger-containing protein.	SH3 domain-containing protein.	0.979
pex12	pex4	F4PIR8	F4PIQ2	RING zinc finger-containing protein.	Putative ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.	0.815
pex12	pex5	F4PIR8	F4PM03	RING zinc finger-containing protein.	Tetratricopeptide-like helical domain-containing protein.	0.990
pex12	pex6	F4PIR8	F4PZN8	RING zinc finger-containing protein.	AAA ATPase domain-containing protein.	0.858