STRINGSTRING
sf3b3 sf3b3 DFA_10856 DFA_10856 DFA_11686 DFA_11686 DFA_09807 DFA_09807 DFA_00554 DFA_00554 snrpA1 snrpA1 prpf8 prpf8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sf3b3CPSF domain-containing protein. (1194 aa)
DFA_10856Uncharacterized protein. (218 aa)
DFA_11686Uncharacterized protein. (899 aa)
DFA_09807Leucine-rich repeat-containing protein. (506 aa)
DFA_00554CPSF_A domain-containing protein. (1355 aa)
snrpA1Leucine-rich repeat-containing protein. (212 aa)
prpf8Pre-mRNA processing factor 8. (2335 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.