STRINGSTRING
DFA_11230 DFA_11230 mcm8 mcm8 DFA_02271 DFA_02271 mcm7 mcm7 pif1 pif1 rad50 rad50 BRIP1 BRIP1 ku80 ku80 DFA_03028 DFA_03028 DFA_03029 DFA_03029 DFA_03459 DFA_03459 mcm6 mcm6 mcm2 mcm2 DFA_05546 DFA_05546 mcm9 mcm9 DFA_05709 DFA_05709 ddx1 ddx1 gtf2f2 gtf2f2 mcm3 mcm3 DFA_04537 DFA_04537 DFA_11501 DFA_11501 DFA_04646 DFA_04646 ku70 ku70 rvb2 rvb2 DFA_01309 DFA_01309 mcm5 mcm5 wrn wrn DFA_00827 DFA_00827 DFA_07258 DFA_07258 repD repD upf1 upf1 repB repB rvb1 rvb1 ino80 ino80 mcm4 mcm4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFA_11230ATP-dependent DNA helicase; Belongs to the helicase family. (1975 aa)
mcm8MCM family protein; Belongs to the MCM family. (822 aa)
DFA_02271AAA_12 domain-containing protein. (1700 aa)
mcm7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (814 aa)
pif1ATP-dependent DNA helicase; Belongs to the helicase family. (673 aa)
rad50DNA recombination/repair protein. (1306 aa)
BRIP1DEAD/DEAH box helicase. (1125 aa)
ku80ATP-dependent DNA helicase. (756 aa)
DFA_03028DEAD/DEAH box helicase. (841 aa)
DFA_03029DEAD/DEAH box helicase. (507 aa)
DFA_03459Putative helicase. (795 aa)
mcm6DNA helicase; Belongs to the MCM family. (912 aa)
mcm2DNA helicase; Belongs to the MCM family. (981 aa)
DFA_05546DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (359 aa)
mcm9MCM family protein; Belongs to the MCM family. (954 aa)
DFA_05709DEAD/DEAH box helicase domain-containing protein. (1556 aa)
ddx1Putative RNA helicase. (771 aa)
gtf2f2TFIIF subunit. (243 aa)
mcm3DNA helicase; Belongs to the MCM family. (1320 aa)
DFA_04537ATP-dependent RNA helicase. (1558 aa)
DFA_11501Uncharacterized protein. (1329 aa)
DFA_04646HD domain-containing protein. (261 aa)
ku70ATP-dependent DNA helicase. (825 aa)
rvb2RuvB-like helicase; Belongs to the RuvB family. (464 aa)
DFA_01309ATP-dependent DNA helicase; Belongs to the helicase family. (1554 aa)
mcm5DNA helicase; Belongs to the MCM family. (722 aa)
wrnATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (926 aa)
DFA_00827T7-like mitochondrial DNA helicase. (711 aa)
DFA_07258ATP-dependent DNA helicase; Belongs to the helicase family. (1927 aa)
repDTranscription factor IIH component. (791 aa)
upf1Helicase. (1162 aa)
repBTranscription factor IIH subunit. (810 aa)
rvb1RuvB-like helicase; Belongs to the RuvB family. (481 aa)
ino80SNF2-related domain-containing protein. (2377 aa)
mcm4DNA helicase; Belongs to the MCM family. (788 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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