STRINGSTRING
slbp slbp DFA_11640 DFA_11640 DFA_11635 DFA_11635 prpf8 prpf8 cwc2 cwc2 DFA_01877 DFA_01877 sf1 sf1 DFA_04271 DFA_04271 u2af1 u2af1 slu7 slu7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
slbpHistone RNA hairpin-binding protein. (301 aa)
DFA_11640RapGAP/RanGAP domain-containing protein. (3032 aa)
DFA_11635CCCH-type zinc finger-containing protein. (389 aa)
prpf8Pre-mRNA processing factor 8. (2335 aa)
cwc2Pre-mRNA-splicing factor cwc2. (487 aa)
DFA_01877SLBP_RNA_bind domain-containing protein. (442 aa)
sf1Uncharacterized protein sf1. (486 aa)
DFA_04271Uncharacterized protein. (826 aa)
u2af1RNA-binding region RNP-1 domain-containing protein. (447 aa)
slu7Putative RNA splicing factor. (558 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.