STRINGSTRING
DFA_07207 DFA_07207 sf1 sf1 DFA_01579 DFA_01579 DFA_01498 DFA_01498 DFA_01101 DFA_01101 DFA_05680 DFA_05680 DFA_06329 DFA_06329 sky1 sky1 DFA_11262 DFA_11262 DFA_10138 DFA_10138 DFA_06697 DFA_06697 srrm1 srrm1 DFA_12242 DFA_12242 mrd1 mrd1 DFA_07315 DFA_07315
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFA_07207Uncharacterized protein. (1179 aa)
sf1Uncharacterized protein sf1. (486 aa)
DFA_01579CMP/dCMP deaminase. (276 aa)
DFA_01498RNA-binding region RNP-1 domain-containing protein. (370 aa)
DFA_01101DUF2040 domain-containing protein. (339 aa)
DFA_05680Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (203 aa)
DFA_06329Uncharacterized protein. (1027 aa)
sky1Uncharacterized protein sky1. (316 aa)
DFA_11262Uncharacterized protein. (499 aa)
DFA_10138Uncharacterized protein. (486 aa)
DFA_06697Uncharacterized protein. (384 aa)
srrm1Putative RNA splicing factor. (534 aa)
DFA_12242Uncharacterized protein. (828 aa)
mrd1RNA-binding region RNP-1 domain-containing protein. (868 aa)
DFA_07315Uncharacterized protein. (551 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.