(14 nodes) Metallo-beta-lactamase network (Cavenderia fasciculata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ints11	Integrator complex subunit 11. (645 aa)
	pdeE	cAMP/cGMP-stimulated cAMP/cGMP phosphodiesterase. (1105 aa)
	DFA_01032	Lactamase_B domain-containing protein. (610 aa)
	pdeD	cGMP-stimulated cGMP phosphodiesterase. (657 aa)
	gloB2	Hydroxyacylglutathione hydrolase. (431 aa)
	DFA_02172	Lactamase_B domain-containing protein. (603 aa)
	DFA_03772	Uncharacterized protein. (899 aa)
	gloB1	Hydroxyacylglutathione hydrolase. (258 aa)
	cpsf3	Beta-lactamase domain-containing protein. (786 aa)
	cpsf2	Cleavage and polyadenylation specificity factor subunit 2. (768 aa)
	ints9	Integrator complex subunit 9. (622 aa)
	DFA_03074	Lactamase_B domain-containing protein. (929 aa)
	DFA_03394	Beta-lactamase-like domain-containing protein. (394 aa)
	DFA_06207	Uncharacterized protein. (731 aa)

Your Current Organism:

Cavenderia fasciculata

NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFA_01032	ints11	F4PV41	F4PSG9	Lactamase_B domain-containing protein.	Integrator complex subunit 11.	0.966
DFA_03074	DFA_03772	F4PGJ5	F4Q0C7	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.900
DFA_03074	DFA_06207	F4PGJ5	F4PKE5	Lactamase_B domain-containing protein.	Uncharacterized protein.	0.900
DFA_03772	DFA_03074	F4Q0C7	F4PGJ5	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.900
DFA_03772	DFA_06207	F4Q0C7	F4PKE5	Uncharacterized protein.	Uncharacterized protein.	0.908
DFA_06207	DFA_03074	F4PKE5	F4PGJ5	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.900
DFA_06207	DFA_03772	F4PKE5	F4Q0C7	Uncharacterized protein.	Uncharacterized protein.	0.908
cpsf2	cpsf3	F4Q9E5	F4Q8H1	Cleavage and polyadenylation specificity factor subunit 2.	Beta-lactamase domain-containing protein.	0.999
cpsf2	ints11	F4Q9E5	F4PSG9	Cleavage and polyadenylation specificity factor subunit 2.	Integrator complex subunit 11.	0.964
cpsf3	cpsf2	F4Q8H1	F4Q9E5	Beta-lactamase domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
ints11	DFA_01032	F4PSG9	F4PV41	Integrator complex subunit 11.	Lactamase_B domain-containing protein.	0.966
ints11	cpsf2	F4PSG9	F4Q9E5	Integrator complex subunit 11.	Cleavage and polyadenylation specificity factor subunit 2.	0.964
ints11	ints9	F4PSG9	F4QEY9	Integrator complex subunit 11.	Integrator complex subunit 9.	0.966
ints9	ints11	F4QEY9	F4PSG9	Integrator complex subunit 9.	Integrator complex subunit 11.	0.966