STRINGSTRING
glnS glnS DFA_11815 DFA_11815 metS metS leuS leuS mileS mileS mgluS mgluS mtyrS mtyrS argS2 argS2 valS1 valS1 ileS ileS argS1 argS1 mtrpS mtrpS gluS gluS mleuS mleuS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glnSGlutamine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (776 aa)
DFA_11815Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (1039 aa)
metSMethionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (733 aa)
leuSLeucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1063 aa)
mileSIsoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1038 aa)
mgluSGlutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (586 aa)
mtyrSTyrosine--tRNA ligase. (487 aa)
argS2Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (730 aa)
valS1Valyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1070 aa)
ileSIsoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1082 aa)
argS1Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (570 aa)
mtrpSTryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (411 aa)
gluSGlutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (764 aa)
mleuSLeucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (979 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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