(83 nodes) Leucine-rich repeat network (Cavenderia fasciculata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DFA_03056	HP domain-containing protein. (592 aa)
	mpl1	Leucine-rich repeat-containing protein. (650 aa)
	carmil	Leucine-rich repeat-containing protein. (1062 aa)
	gacS	RhoGAP domain-containing protein. (1913 aa)
	DFA_04663	Uncharacterized protein. (602 aa)
	DFA_04643	Uncharacterized protein. (744 aa)
	DFA_04302	Putative splicing endonuclease. (1947 aa)
	DFA_04799	F-box domain-containing protein. (402 aa)
	gacW	Leucine-rich repeat-containing protein. (1021 aa)
	DFA_04907	Uncharacterized protein. (1042 aa)
	DFA_05676	Putative zinc transporter. (815 aa)
	DFA_05598	Uncharacterized protein. (1222 aa)
	DFA_05493	Uncharacterized protein. (522 aa)
	DFA_05431	Uncharacterized protein. (669 aa)
	DFA_06316	Uncharacterized protein. (685 aa)
	pats1	Leucine-rich repeat-containing protein. (2671 aa)
	DFA_06198	Uncharacterized protein. (619 aa)
	DFA_06178	FERM domain-containing protein. (1451 aa)
	DFA_06548	Uncharacterized protein. (771 aa)
	DFA_02902	Tenascin C. (1183 aa)
	DFA_02900	EGF-like protein. (2260 aa)
	DFA_02823	Uncharacterized protein. (221 aa)
	DFA_03616	Uncharacterized protein. (2638 aa)
	drkD	Leucine-rich repeat-containing protein. (1187 aa)
	DFA_03545	RGS domain-containing protein. (2022 aa)
	DFA_03466	Uncharacterized protein. (1101 aa)
	DFA_03321	Uncharacterized protein. (428 aa)
	vilD	Villin. (1675 aa)
	DFA_03228	Leucine-rich repeat-containing protein. (1437 aa)
	DFA_11131	Leucine-rich repeat-containing protein. (642 aa)
	DFA_11959	Uncharacterized protein. (749 aa)
	DFA_11699	Filamin/ABP280 repeat-containing protein. (491 aa)
	DFA_11686	Uncharacterized protein. (899 aa)
	pirA	Component of SCAR regulatory complex. (1866 aa)
	roco4	Leucine-rich repeat-containing protein. (1455 aa)
	DFA_12227	Uncharacterized protein. (759 aa)
	DFA_10915	PPM-type phosphatase domain-containing protein. (694 aa)
	DFA_10856	Uncharacterized protein. (218 aa)
	mpl3	Leucine-rich repeat-containing protein. (680 aa)
	DFA_10798	Uncharacterized protein. (760 aa)
	DFA_10731	SH2 domain-containing protein. (993 aa)
	DFA_10347	Integrase catalytic domain-containing protein. (1568 aa)
	DFA_10244	Uncharacterized protein. (1381 aa)
	DFA_10168	ADP-ribosylation like factor. (834 aa)
	DFA_09768	Leucine-rich repeat-containing protein. (519 aa)
	gefN	Ras guanine nucleotide exchange factor. (1720 aa)
	DFA_09657	EGF-like domain-containing protein. (1044 aa)
	DFA_09619	Uncharacterized protein. (1154 aa)
	DFA_09610	EGF-like protein. (1000 aa)
	DFA_09607	Uncharacterized protein. (1942 aa)
	DFA_09555	Uncharacterized protein. (1040 aa)
	roco9	Leucine-rich repeat-containing protein. (2893 aa)
	DFA_09213	C2 domain-containing protein. (619 aa)
	DFA_09166	Uncharacterized protein. (827 aa)
	DFA_09057	Uncharacterized protein. (510 aa)
	roco6	Pleckstrin domain-containing protein. (2140 aa)
	DFA_08918	Roc domain-containing protein. (626 aa)
	lrrA	Leucine-rich repeat-containing protein. (399 aa)
	DFA_07948	RapGAP/RanGAP domain-containing protein. (1638 aa)
	DFA_07848	Non-receptor tyrosine kinase. (2444 aa)
	DFA_07787	Response regulatory domain-containing protein. (504 aa)
	DFA_07756	Uncharacterized protein. (432 aa)
	DFA_07708	Leucine-rich repeat-containing protein. (812 aa)
	DFA_06786	Ras-GEF domain-containing protein. (551 aa)
	snrpA1	Leucine-rich repeat-containing protein. (212 aa)
	pprA	Protein phosphatase 1. (365 aa)
	DFA_04060	Ras suppressor protein. (291 aa)
	AAC1	Uncharacterized protein AAC1. (893 aa)
	DFA_03872	Uncharacterized protein. (622 aa)
	DFA_02249	Histidine kinase A. (1765 aa)
	DFA_02179	Protein phosphatase 2C. (1469 aa)
	DFA_00089	Protein kinase. (2637 aa)
	tbcE	Tubulin binding cofactor E. (481 aa)
	DFA_07478	Leucine-rich repeat-containing protein. (1920 aa)
	DFA_07435	Uncharacterized protein. (717 aa)
	DFA_07212	Putative guanine nucleotide exchange factor. (2085 aa)
	DFA_07068	Uncharacterized protein. (762 aa)
	DFA_00980	Leucine-rich repeat-containing protein. (759 aa)
	DFA_00953	Uncharacterized protein. (407 aa)
	roco10	Kelch repeat-containing protein. (2404 aa)
	DFA_01708	Uncharacterized protein. (504 aa)
	DFA_00852	Leucine-rich repeat-containing protein. (640 aa)
	DFA_00767	Uncharacterized protein. (1597 aa)

Your Current Organism:

Cavenderia fasciculata

NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFA_00089	lrrA	F4PXK1	F4Q4T4	Protein kinase.	Leucine-rich repeat-containing protein.	0.565
DFA_00767	DFA_04663	F4PTS1	F4PQ71	Uncharacterized protein.	Uncharacterized protein.	0.469
DFA_00767	DFA_10856	F4PTS1	F4QBL0	Uncharacterized protein.	Uncharacterized protein.	0.795
DFA_00767	DFA_11686	F4PTS1	F4QDX8	Uncharacterized protein.	Uncharacterized protein.	0.795
DFA_00767	lrrA	F4PTS1	F4Q4T4	Uncharacterized protein.	Leucine-rich repeat-containing protein.	0.592
DFA_00767	snrpA1	F4PTS1	F4Q207	Uncharacterized protein.	Leucine-rich repeat-containing protein.	0.795
DFA_03321	DFA_04663	F4PH91	F4PQ71	Uncharacterized protein.	Uncharacterized protein.	0.491
DFA_04663	DFA_00767	F4PQ71	F4PTS1	Uncharacterized protein.	Uncharacterized protein.	0.469
DFA_04663	DFA_03321	F4PQ71	F4PH91	Uncharacterized protein.	Uncharacterized protein.	0.491
DFA_07435	DFA_09213	F4PWE8	F4Q703	Uncharacterized protein.	C2 domain-containing protein.	0.444
DFA_07435	lrrA	F4PWE8	F4Q4T4	Uncharacterized protein.	Leucine-rich repeat-containing protein.	0.603
DFA_07435	mpl1	F4PWE8	F4PRM8	Uncharacterized protein.	Leucine-rich repeat-containing protein.	0.445
DFA_07478	lrrA	F4PWJ0	F4Q4T4	Leucine-rich repeat-containing protein.	Leucine-rich repeat-containing protein.	0.565
DFA_09213	DFA_07435	F4Q703	F4PWE8	C2 domain-containing protein.	Uncharacterized protein.	0.444
DFA_10856	DFA_00767	F4QBL0	F4PTS1	Uncharacterized protein.	Uncharacterized protein.	0.795
DFA_11686	DFA_00767	F4QDX8	F4PTS1	Uncharacterized protein.	Uncharacterized protein.	0.795
drkD	lrrA	F4PI07	F4Q4T4	Leucine-rich repeat-containing protein.	Leucine-rich repeat-containing protein.	0.565
lrrA	DFA_00089	F4Q4T4	F4PXK1	Leucine-rich repeat-containing protein.	Protein kinase.	0.565
lrrA	DFA_00767	F4Q4T4	F4PTS1	Leucine-rich repeat-containing protein.	Uncharacterized protein.	0.592
lrrA	DFA_07435	F4Q4T4	F4PWE8	Leucine-rich repeat-containing protein.	Uncharacterized protein.	0.603