STRINGSTRING
DFA_03692 DFA_03692 u2af1 u2af1 DFA_05604 DFA_05604 DFA_05557 DFA_05557 set1 set1 DFA_05371 DFA_05371 DFA_05363 DFA_05363 DFA_05314 DFA_05314 DFA_06344 DFA_06344 DFA_06343 DFA_06343 DFA_06329 DFA_06329 eIF3s4 eIF3s4 DFA_03689 DFA_03689 DFA_03688 DFA_03688 DFA_02638 DFA_02638 DFA_06238 DFA_06238 DFA_06065 DFA_06065 DFA_06543 DFA_06543 DFA_06506 DFA_06506 DFA_06499 DFA_06499 rnpA rnpA ncbp2 ncbp2 DFA_03608 DFA_03608 ssbA ssbA DFA_02122 DFA_02122 DFA_02151 DFA_02151 DFA_00198 DFA_00198 DFA_00053 DFA_00053 DFA_06890 DFA_06890 DFA_07562 DFA_07562 DFA_07498 DFA_07498 pabpc1A pabpc1A DFA_07315 DFA_07315 DFA_07298 DFA_07298 DFA_07057 DFA_07057 cwc2 cwc2 DFA_04655 DFA_04655 DFA_04271 DFA_04271 tra2 tra2 DFA_05210 DFA_05210 DFA_05149 DFA_05149 DFA_04999 DFA_04999 DFA_05842 DFA_05842 DFA_01856 DFA_01856 DFA_01843 DFA_01843 DFA_01769 DFA_01769 DFA_01753 DFA_01753 DFA_00806 DFA_00806 DFA_06645 DFA_06645 DFA_05841 DFA_05841 DFA_11897 DFA_11897 DFA_11785 DFA_11785 DFA_11767 DFA_11767 DFA_11700 DFA_11700 DFA_11691 DFA_11691 DFA_11690 DFA_11690 DFA_11640 DFA_11640 DFA_11635 DFA_11635 mrd1 mrd1 DFA_11479 DFA_11479 DFA_11366 DFA_11366 DFA_11272 DFA_11272 eIF3s9 eIF3s9 DFA_10740 DFA_10740 DFA_10693 DFA_10693 wdr75 wdr75 DFA_10654 DFA_10654 DFA_09819 DFA_09819 DFA_09812 DFA_09812 DFA_06697 DFA_06697 snrpB2 snrpB2 DFA_03384 DFA_03384 DFA_03358 DFA_03358 DFA_03278 DFA_03278 pabpc1B pabpc1B DFA_03130 DFA_03130 DFA_03024 DFA_03024 DFA_08554 DFA_08554 DFA_10469 DFA_10469 DFA_10238 DFA_10238 cstf2 cstf2 DFA_07810 DFA_07810 esf2 esf2 DFA_08082 DFA_08082 DFA_08199 DFA_08199 DFA_07599 DFA_07599 DFA_10115 DFA_10115 DFA_10084 DFA_10084 pex3 pex3 DFA_09647 DFA_09647 DFA_08425 DFA_08425 DFA_09054 DFA_09054 DFA_09531 DFA_09531 DFA_09393 DFA_09393 rbm8A rbm8A DFA_00779 DFA_00779 snrp70 snrp70 DFA_00660 DFA_00660 DFA_01498 DFA_01498 DFA_01425 DFA_01425 DFA_01399 DFA_01399 DFA_00383 DFA_00383 DFA_00379 DFA_00379 DFA_00377 DFA_00377 DFA_01993 DFA_01993 DFA_01091 DFA_01091 pabpn1 pabpn1 DFA_01081 DFA_01081 DFA_01040 DFA_01040 DFA_04683 DFA_04683 DFA_04682 DFA_04682
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DFA_03692Uncharacterized protein. (1061 aa)
u2af1RNA-binding region RNP-1 domain-containing protein. (447 aa)
DFA_05604RNA recognition motif-containing protein RRM. (439 aa)
DFA_05557RNA-binding region RNP-1 domain-containing protein. (302 aa)
set1SET domain-containing protein. (1359 aa)
DFA_05371Uncharacterized protein. (1340 aa)
DFA_05363Uncharacterized protein. (939 aa)
DFA_05314RRM domain-containing protein. (527 aa)
DFA_06344RNA-binding region RNP-1 domain-containing protein. (304 aa)
DFA_06343RRM domain-containing protein. (91 aa)
DFA_06329Uncharacterized protein. (1027 aa)
eIF3s4RNA-binding region RNP-1 domain-containing protein. (235 aa)
DFA_03689RRM domain-containing protein. (128 aa)
DFA_03688RNA-binding region RNP-1 domain-containing protein. (435 aa)
DFA_02638SAP DNA-binding domain-containing protein. (927 aa)
DFA_06238J domain-containing protein. (319 aa)
DFA_06065Uncharacterized protein. (1151 aa)
DFA_06543RNA-binding region RNP-1 domain-containing protein. (280 aa)
DFA_06506RNA recognition motif-containing protein RRM. (770 aa)
DFA_06499RRM domain-containing protein. (97 aa)
rnpARNA-binding region RNP-1 domain-containing protein. (497 aa)
ncbp2Nuclear cap-binding protein subunit 2. (200 aa)
DFA_03608Uncharacterized protein. (1145 aa)
ssbASsRNA-binding protein. (316 aa)
DFA_02122Uncharacterized protein. (622 aa)
DFA_02151RRM domain-containing protein. (614 aa)
DFA_00198RNA-binding region RNP-1 domain-containing protein. (299 aa)
DFA_00053Uncharacterized protein. (754 aa)
DFA_06890RRM Nup35-type domain-containing protein. (2148 aa)
DFA_07562SAP DNA-binding domain-containing protein. (633 aa)
DFA_07498RNA-binding region RNP-1 domain-containing protein. (323 aa)
pabpc1APolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (567 aa)
DFA_07315Uncharacterized protein. (551 aa)
DFA_07298Uncharacterized protein. (425 aa)
DFA_07057Uncharacterized protein. (926 aa)
cwc2Pre-mRNA-splicing factor cwc2. (487 aa)
DFA_04655Zinc finger protein. (1780 aa)
DFA_04271Uncharacterized protein. (826 aa)
tra2RNA-binding region RNP-1 domain-containing protein. (304 aa)
DFA_05210Uncharacterized protein. (450 aa)
DFA_05149RNA recognition motif-containing protein RRM. (119 aa)
DFA_04999RNA-binding region RNP-1 domain-containing protein. (350 aa)
DFA_05842RNA-binding region RNP-1 domain-containing protein. (404 aa)
DFA_01856Uncharacterized protein. (568 aa)
DFA_01843C2H2-type zinc finger-containing protein. (998 aa)
DFA_01769Smg4_UPF3 domain-containing protein. (206 aa)
DFA_01753Poly [ADP-ribose] polymerase. (1780 aa)
DFA_00806RNA recognition motif-containing protein. (454 aa)
DFA_06645RNA-binding region RNP-1 domain-containing protein. (670 aa)
DFA_05841Uncharacterized protein. (111 aa)
DFA_11897RRM domain-containing protein. (149 aa)
DFA_11785RNA-binding region RNP-1 domain-containing protein. (599 aa)
DFA_11767RNA-binding region RNP-1 domain-containing protein. (627 aa)
DFA_11700RNA-binding region RNP-1 domain-containing protein. (949 aa)
DFA_11691RRM domain-containing protein. (1767 aa)
DFA_11690RRM domain-containing protein. (831 aa)
DFA_11640RapGAP/RanGAP domain-containing protein. (3032 aa)
DFA_11635CCCH-type zinc finger-containing protein. (389 aa)
mrd1RNA-binding region RNP-1 domain-containing protein. (868 aa)
DFA_11479Lupus La protein. (393 aa)
DFA_11366Uncharacterized protein. (620 aa)
DFA_11272RNA-binding region RNP-1 domain-containing protein. (662 aa)
eIF3s9Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (679 aa)
DFA_10740RRM domain-containing protein. (668 aa)
DFA_10693RNA recognition motif-containing protein RRM. (483 aa)
wdr75WD40 repeat-containing protein. (1122 aa)
DFA_10654Uncharacterized protein. (715 aa)
DFA_09819RNA-binding region RNP-1 domain-containing protein. (505 aa)
DFA_09812Putative RNA splicing factor. (637 aa)
DFA_06697Uncharacterized protein. (384 aa)
snrpB2U2 small nuclear ribonucleoprotein B. (241 aa)
DFA_03384RNA-binding region RNP-1 domain-containing protein. (297 aa)
DFA_03358Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (495 aa)
DFA_03278Uncharacterized protein. (1049 aa)
pabpc1BRNA-binding region RNP-1 domain-containing protein. (748 aa)
DFA_03130RRM domain-containing protein. (332 aa)
DFA_03024Uncharacterized protein. (1023 aa)
DFA_08554Uncharacterized protein. (926 aa)
DFA_10469RNA-binding region RNP-1 domain-containing protein. (382 aa)
DFA_10238Uncharacterized protein. (267 aa)
cstf2RNA-binding region RNP-1 domain-containing protein. (436 aa)
DFA_07810RING zinc finger-containing protein. (1244 aa)
esf2RNA-binding region RNP-1 domain-containing protein. (288 aa)
DFA_08082Uncharacterized protein. (351 aa)
DFA_08199RNA-binding region RNP-1 domain-containing protein. (697 aa)
DFA_07599RRM domain-containing protein. (903 aa)
DFA_10115RRM domain-containing protein. (407 aa)
DFA_10084Uncharacterized protein. (1149 aa)
pex3Transmembrane protein. (641 aa)
DFA_09647RNA-binding region RNP-1 domain-containing protein. (372 aa)
DFA_08425Uncharacterized protein. (603 aa)
DFA_09054BRCT domain-containing protein. (630 aa)
DFA_09531RRM domain-containing protein. (582 aa)
DFA_09393RNA-binding region RNP-1 domain-containing protein. (656 aa)
rbm8ARNA recognition motif-containing protein RRM. (211 aa)
DFA_00779Uncharacterized protein. (337 aa)
snrp70U1 small nuclear ribonucleoprotein 70 kDa protein. (433 aa)
DFA_00660Uncharacterized protein. (458 aa)
DFA_01498RNA-binding region RNP-1 domain-containing protein. (370 aa)
DFA_01425Uncharacterized protein. (109 aa)
DFA_01399RNA-binding region RNP-1 domain-containing protein. (345 aa)
DFA_00383B box-type domain-containing protein. (823 aa)
DFA_00379Calmodulin-binding protein. (1042 aa)
DFA_00377Uncharacterized protein. (879 aa)
DFA_01993RRM domain-containing protein. (211 aa)
DFA_01091C2H2-type zinc finger-containing protein. (888 aa)
pabpn1Polyadenylate-binding protein 2. (243 aa)
DFA_01081Uncharacterized protein. (850 aa)
DFA_01040RRM domain-containing protein. (428 aa)
DFA_04683RNA-binding region RNP-1 domain-containing protein. (348 aa)
DFA_04682RRM domain-containing protein. (336 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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