(9 nodes) PIN-like domain superfamily network (Cavenderia fasciculata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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co-expression

protein homology

Your Input:
	exo1	5'3'-exonuclease N-and I-domain-containing protein. (994 aa)
	DFA_11908	Uncharacterized protein. (1098 aa)
	DFA_03617	Uncharacterized protein. (651 aa)
	DFA_08061	Uncharacterized protein. (661 aa)
	DFA_08841	Putative exoribonuclease. (626 aa)
	polA	Mitochondrial DNA polymerase A. (1855 aa)
	DFA_03952	5'3'-exonuclease N-and I-domain-containing protein. (715 aa)
	fcf1	FCF1 family protein. (378 aa)
	repG	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (308 aa)

Your Current Organism:

Cavenderia fasciculata

NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFA_08061	exo1	F4Q4X3	F4PIH2	Uncharacterized protein.	5'3'-exonuclease N-and I-domain-containing protein.	0.400
DFA_11908	exo1	F4QEN0	F4PIH2	Uncharacterized protein.	5'3'-exonuclease N-and I-domain-containing protein.	0.478
DFA_11908	polA	F4QEN0	F4Q2H1	Uncharacterized protein.	Mitochondrial DNA polymerase A.	0.509
DFA_11908	repG	F4QEN0	F4PNV7	Uncharacterized protein.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.425
exo1	DFA_08061	F4PIH2	F4Q4X3	5'3'-exonuclease N-and I-domain-containing protein.	Uncharacterized protein.	0.400
exo1	DFA_11908	F4PIH2	F4QEN0	5'3'-exonuclease N-and I-domain-containing protein.	Uncharacterized protein.	0.478
exo1	polA	F4PIH2	F4Q2H1	5'3'-exonuclease N-and I-domain-containing protein.	Mitochondrial DNA polymerase A.	0.669
exo1	repG	F4PIH2	F4PNV7	5'3'-exonuclease N-and I-domain-containing protein.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.769
polA	DFA_11908	F4Q2H1	F4QEN0	Mitochondrial DNA polymerase A.	Uncharacterized protein.	0.509
polA	exo1	F4Q2H1	F4PIH2	Mitochondrial DNA polymerase A.	5'3'-exonuclease N-and I-domain-containing protein.	0.669
polA	repG	F4Q2H1	F4PNV7	Mitochondrial DNA polymerase A.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.560
repG	DFA_11908	F4PNV7	F4QEN0	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	Uncharacterized protein.	0.425
repG	exo1	F4PNV7	F4PIH2	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	5'3'-exonuclease N-and I-domain-containing protein.	0.769
repG	polA	F4PNV7	F4Q2H1	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	Mitochondrial DNA polymerase A.	0.560