STRINGSTRING
gtf2h1 gtf2h1 cdk9-2 cdk9-2 gtf2f1 gtf2f1 plk plk DFA_03412 DFA_03412 tcea1 tcea1 rpb9 rpb9 DFA_03649 DFA_03649 sigI sigI gpi gpi DFA_06425 DFA_06425 DFA_06486 DFA_06486 DFA_06488 DFA_06488 prkag prkag trxC trxC DFA_06067 DFA_06067 cdk5 cdk5 bud32 bud32 DFA_06236 DFA_06236 DFA_06245 DFA_06245 nek4 nek4 rabggtb rabggtb DFA_05403 DFA_05403 rpkA rpkA DFA_05468 DFA_05468 DFA_05510 DFA_05510 DFA_05511 DFA_05511 DFA_05663 DFA_05663 raptor raptor DFA_04847 DFA_04847 gtf2h3 gtf2h3 pdkB pdkB atr1 atr1 PIPkinA PIPkinA pkgE_ps pkgE_ps gtf2f2 gtf2f2 DFA_05187 DFA_05187 mrkB mrkB btg btg DFA_04637 DFA_04637 DFA_04665 DFA_04665 DFA_04701 DFA_04701 gtf2h2 gtf2h2 smg1 smg1 DFA_01051 DFA_01051 DFA_01053 DFA_01053 DFA_01113 DFA_01113 DFA_01132 DFA_01132 DFA_01197 DFA_01197 dyrk2 dyrk2 DFA_01206 DFA_01206 DFA_01241 DFA_01241 DFA_01289 DFA_01289 DFA_01294 DFA_01294 snfA snfA DFA_00526 DFA_00526 rpb6 rpb6 DFA_01466 DFA_01466 exdl2A exdl2A csnk2b csnk2b wrn wrn DFA_00670 DFA_00670 spt16 spt16 rpb4 rpb4 gtf2h4 gtf2h4 DFA_01595 DFA_01595 DFA_00782 DFA_00782 DFA_00810 DFA_00810 cdk7 cdk7 aifB aifB gsr gsr DFA_00849 DFA_00849 trxC-2 trxC-2 DFA_00926 DFA_00926 DFA_01771 DFA_01771 DFA_01772 DFA_01772 spt4 spt4 DFA_00935 DFA_00935 DFA_01796 DFA_01796 rheb rheb DFA_01875 DFA_01875 DFA_01892 DFA_01892 casK casK repD repD rpb10 rpb10 g6pd-2 g6pd-2 DFA_07353 DFA_07353 DFA_07499 DFA_07499 DFA_07558 DFA_07558 cycK cycK DFA_06971 DFA_06971 ssrp1 ssrp1 DFA_06980 DFA_06980 surf1-2 surf1-2 DFA_00036 DFA_00036 DFA_00056 DFA_00056 piaA piaA prdx4 prdx4 top3 top3 rabggta rabggta DFA_02210 DFA_02210 rpb12 rpb12 mnat1 mnat1 DFA_02527 DFA_02527 ragC ragC DFA_03843 DFA_03843 rpb2 rpb2 DFA_03999 DFA_03999 DFA_04101 DFA_04101 DFA_06657 DFA_06657 spt5 spt5 DFA_08556 DFA_08556 DFA_08601 DFA_08601 rpb3 rpb3 DFA_07810 DFA_07810 DFA_08720 DFA_08720 DFA_07897 DFA_07897 pkbA pkbA rpb8 rpb8 DFA_07980 DFA_07980 rad9 rad9 cxeA cxeA DFA_08269 DFA_08269 DFA_08274 DFA_08274 DFA_08295 DFA_08295 DFA_08324 DFA_08324 DFA_08402 DFA_08402 slmo slmo DFA_09035 DFA_09035 cut5 cut5 pdkA pdkA DFA_09245 DFA_09245 DFA_09250 DFA_09250 DFA_09361 DFA_09361 cdc25 cdc25 rpb1 rpb1 DFA_09675 DFA_09675 ragA ragA DFA_09793 DFA_09793 DFA_09880 DFA_09880 tor tor DFA_10126 DFA_10126 DFA_10177 DFA_10177 DFA_10353 DFA_10353 DFA_09803 DFA_09803 DFA_10831 DFA_10831 DFA_10928 DFA_10928 repB repB DFA_11387 DFA_11387 DFA_12250 DFA_12250 fttB fttB DFA_11021 DFA_11021 cox11 cox11 DFA_11986 DFA_11986 DFA_12008 DFA_12008 lst8 lst8 DFA_11237 DFA_11237 rfa1 rfa1 DFA_11250 DFA_11250 pinA pinA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gtf2h1General transcription factor IIH component. (611 aa)
cdk9-2Uncharacterized protein cdk9-2. (524 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (585 aa)
plkSerine/threonine-protein kinase PLK. (856 aa)
DFA_03412PKS_ER domain-containing protein. (359 aa)
tcea1RNA polymerase II elongation factor. (325 aa)
rpb9RNA polymerase II core subunit. (108 aa)
DFA_03649Ubiquitin domain-containing protein. (2245 aa)
sigICystathionine-beta-synthase domain-containing protein. (308 aa)
gpiGlucose-6-phosphate isomerase; Belongs to the GPI family. (556 aa)
DFA_06425Ras interacting protein. (630 aa)
DFA_06486Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (423 aa)
DFA_06488Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (1082 aa)
prkagCystathionine-beta-synthase domain-containing protein. (576 aa)
trxCThioredoxin; Belongs to the thioredoxin family. (109 aa)
DFA_06067Uncharacterized protein. (416 aa)
cdk5Protein serine/threonine kinase; Belongs to the protein kinase superfamily. (293 aa)
bud32Uncharacterized protein bud32. (300 aa)
DFA_06236Putative CCR4-NOT complex subunit 1. (2350 aa)
DFA_06245Bromodomain-containing protein. (1139 aa)
nek4Uncharacterized protein nek4. (865 aa)
rabggtbGeranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (338 aa)
DFA_05403Uncharacterized protein. (175 aa)
rpkAG-protein-coupled receptor family protein. (544 aa)
DFA_054683'-5' exonuclease domain-containing protein. (455 aa)
DFA_05510Protein serine/threonine kinase. (336 aa)
DFA_05511Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (318 aa)
DFA_05663SH3 domain-containing protein. (1182 aa)
raptorWD40 repeat-containing protein. (1388 aa)
DFA_048475'-3' exonuclease domain-containing protein. (487 aa)
gtf2h3General transcription factor IIH. (304 aa)
pdkBUncharacterized protein pdkB. (592 aa)
atr1Protein kinase; Belongs to the PI3/PI4-kinase family. (2763 aa)
PIPkinAAnkyrin repeat-containing protein. (1366 aa)
pkgE_psNon-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (434 aa)
gtf2f2TFIIF subunit. (243 aa)
DFA_05187Uncharacterized protein. (403 aa)
mrkBNon-specific serine/threonine protein kinase. (715 aa)
btgAnti-proliferative BTG domain-containing protein. (370 aa)
DFA_04637Uncharacterized protein. (397 aa)
DFA_04665Uncharacterized protein. (824 aa)
DFA_04701Uncharacterized protein. (330 aa)
gtf2h2General transcription factor IIH subunit. (457 aa)
smg1Protein kinase; Belongs to the PI3/PI4-kinase family. (1938 aa)
DFA_01051Putative phosphatidylinositol phosphate kinase. (661 aa)
DFA_01053Uncharacterized protein. (394 aa)
DFA_01113NOT2/NOT3/NOT5 family protein. (774 aa)
DFA_01132Protein kinase domain-containing protein. (1058 aa)
DFA_01197Uncharacterized protein. (2130 aa)
dyrk2Uncharacterized protein dyrk2. (819 aa)
DFA_01206NDK domain-containing protein; Belongs to the NDK family. (159 aa)
DFA_01241Uncharacterized protein. (529 aa)
DFA_01289Uncharacterized protein. (443 aa)
DFA_01294BTP domain-containing protein. (368 aa)
snfANon-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (490 aa)
DFA_00526Uncharacterized protein. (244 aa)
rpb6RNA polymerase II core subunit. (125 aa)
DFA_01466Non-specific serine/threonine protein kinase. (669 aa)
exdl2A3'-5' exonuclease domain-containing protein. (639 aa)
csnk2bCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (217 aa)
wrnATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (926 aa)
DFA_00670DUF862 domain-containing protein. (318 aa)
spt16FACT complex subunit SPT16. (1033 aa)
rpb4DNA-directed RNA polymerase II subunit 4. (138 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (453 aa)
DFA_01595Thioredoxin domain-containing protein. (305 aa)
DFA_00782Putative quinone oxidoreductase. (334 aa)
DFA_00810Uncharacterized protein. (436 aa)
cdk7P34-cdc2 protein; Belongs to the protein kinase superfamily. (336 aa)
aifBPutative apoptosis inducing factor. (382 aa)
gsrGlutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (505 aa)
DFA_00849RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (757 aa)
trxC-2Thioredoxin. (111 aa)
DFA_00926PHD Zn finger-containing protein. (1031 aa)
DFA_01771Putative phosphatidylinositol phosphate kinase. (952 aa)
DFA_01772Uncharacterized protein. (177 aa)
spt4Transcription initiation factor Spt4. (131 aa)
DFA_00935IGR domain-containing protein. (266 aa)
DFA_01796Protein kinase domain-containing protein. (955 aa)
rhebRas GTPase. (183 aa)
DFA_01875NDR family protein. (376 aa)
DFA_01892Thioredoxin domain-containing protein. (328 aa)
casKProtein serine/threonine kinase; Belongs to the protein kinase superfamily. (342 aa)
repDTranscription factor IIH component. (791 aa)
rpb10RNA polymerase N/8 kDa subunit. (74 aa)
g6pd-2Glucose 6-phosphate-1-dehydrogenase. (469 aa)
DFA_07353Uncharacterized protein. (217 aa)
DFA_07499Rab escort protein. (677 aa)
DFA_07558Putative transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. (108 aa)
cycKCyclin; Belongs to the cyclin family. (600 aa)
DFA_06971Cytochrome c oxidase subunit VIb. (108 aa)
ssrp1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (510 aa)
DFA_06980Uncharacterized protein. (543 aa)
surf1-2SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (224 aa)
DFA_00036Uncharacterized protein. (103 aa)
DFA_00056RICTOR_N domain-containing protein. (793 aa)
piaACytosolic regulator of adenylyl cyclase. (555 aa)
prdx4Peroxiredoxin. (201 aa)
top3DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (812 aa)
rabggtaProtein geranylgeranyltransferase type II. (310 aa)
DFA_02210NOT2/NOT3/NOT5 family protein. (530 aa)
rpb12RNA polymerase. (67 aa)
mnat1CDK-activating kinase assembly factor MAT1. (323 aa)
DFA_02527Uncharacterized protein. (385 aa)
ragCRas-related GTP-binding protein. (356 aa)
DFA_03843Phosphatidylinositol-4-phosphate 5-kinase family protein. (820 aa)
rpb2DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1565 aa)
DFA_03999Uncharacterized protein. (358 aa)
DFA_04101Histidine kinase. (329 aa)
DFA_06657RNA polymerase II core subunit. (1128 aa)
spt5Transcription elongation factor SPT5. (1072 aa)
DFA_08556Uncharacterized protein. (174 aa)
DFA_08601Uncharacterized protein. (317 aa)
rpb3RNA polymerase II core subunit. (296 aa)
DFA_07810RING zinc finger-containing protein. (1244 aa)
DFA_08720Uncharacterized protein. (688 aa)
DFA_07897Cell differentiation family protein. (329 aa)
pkbAProtein serine/threonine kinase; Belongs to the protein kinase superfamily. (440 aa)
rpb8RNA polymerase II core subunit. (164 aa)
DFA_07980Uncharacterized protein. (634 aa)
rad9Component of 9-1-1 complex. (525 aa)
cxeACytochrome c oxidase subunit V. (289 aa)
DFA_08269Cystathionine-beta-synthase domain-containing protein. (364 aa)
DFA_08274Zinc-containing alcohol dehydrogenase. (291 aa)
DFA_08295Helicase domain-containing protein. (969 aa)
DFA_08324Uncharacterized protein. (314 aa)
DFA_08402TH1 family protein. (626 aa)
slmoSlowmo family protein. (302 aa)
DFA_09035Pleckstrin domain-containing protein. (782 aa)
cut5BRCT domain-containing protein. (1243 aa)
pdkAUncharacterized protein pdkA. (602 aa)
DFA_09245CAF1 family protein. (405 aa)
DFA_09250Protein kinase domain-containing protein. (644 aa)
DFA_09361Sestrin-like protein. (595 aa)
cdc25Tyrosine phosphatase. (890 aa)
rpb1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1701 aa)
DFA_09675Phosphatidylinositol-4-phosphate 5-kinase family protein. (1053 aa)
ragARas-related GTP-binding protein. (306 aa)
DFA_09793Endonuclease/exonuclease/phosphatase domain-containing protein. (558 aa)
DFA_09880Uncharacterized protein. (442 aa)
torProtein kinase; Belongs to the PI3/PI4-kinase family. (2366 aa)
DFA_10126KxDL domain-containing protein. (137 aa)
DFA_10177Protein kinase domain-containing protein. (353 aa)
DFA_10353PUL domain-containing protein. (468 aa)
DFA_09803Uncharacterized protein. (89 aa)
DFA_10831Cell differentiation family. (400 aa)
DFA_10928PHD zinc finger-containing protein. (1524 aa)
repBTranscription factor IIH subunit. (810 aa)
DFA_11387Uncharacterized protein. (757 aa)
DFA_12250PKS_ER domain-containing protein. (552 aa)
fttBUncharacterized protein fttB; Belongs to the 14-3-3 family. (372 aa)
DFA_11021Uncharacterized protein. (78 aa)
cox11Cytochrome c oxidase assembly protein. (316 aa)
DFA_11986Uncharacterized protein. (327 aa)
DFA_12008Redoxin domain-containing protein. (199 aa)
lst8WD40 repeat-containing protein. (306 aa)
DFA_11237Putative CCR4-NOT complex subunit 10. (929 aa)
rfa1Putative ssDNA-binding protein. (669 aa)
DFA_11250REPA_OB_2 domain-containing protein. (520 aa)
pinAUncharacterized protein pinA. (374 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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