40 items (Cavenderia fasciculata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DFA_03649	Ubiquitin domain-containing protein. (2245 aa)
	DFA_04645	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (539 aa)
	DFA_01039	Tetratricopeptide-like helical domain-containing protein. (594 aa)
	DFA_01090	Uncharacterized protein. (374 aa)
	DFA_01959	VCP-like ATPase. (780 aa)
	ubqD	Ubiquitin. (162 aa)
	DFA_00653	MYND-type domain-containing protein. (508 aa)
	pdeE	cAMP/cGMP-stimulated cAMP/cGMP phosphodiesterase. (1105 aa)
	DFA_01656	Uncharacterized protein. (1111 aa)
	DFA_01803	BTB domain-containing protein. (872 aa)
	cdc73	RNA polymerase II complex component. (452 aa)
	DFA_00182	Uncharacterized protein. (229 aa)
	cdcD	Cell division cycle protein 48; Belongs to the AAA ATPase family. (798 aa)
	tubA	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (461 aa)
	DFA_03857	RING-type domain-containing protein. (648 aa)
	DFA_03985	OS-9-related protein. (476 aa)
	psmB6	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (214 aa)
	DFA_08809	Putative ATPase. (828 aa)
	DFA_08048	Cell division control protein. (1093 aa)
	DFA_08081	AAA ATPase domain-containing protein. (756 aa)
	DFA_08361	TPR_REGION domain-containing protein. (1706 aa)
	psmB1	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (236 aa)
	DFA_10126	KxDL domain-containing protein. (137 aa)
	ubqJ	Ubiquitin. (380 aa)
	ubqA	Ubiquitin. (381 aa)
	tubB	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (456 aa)
	DFA_11517	Uncharacterized protein. (579 aa)
	DFA_11741	PDCD2_C domain-containing protein. (377 aa)
	derl1	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (233 aa)
	DFA_04563	Uncharacterized protein. (553 aa)
	acaA	Adenylyl cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (1468 aa)
	amfr	Putative ubiquitin-protein ligase. (370 aa)
	kif8	WD40 repeat-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1522 aa)
	DFA_05748	Protein kinase domain-containing protein. (963 aa)
	DFA_04839	Membrane bound O-acyl transferase family protein; Belongs to the membrane-bound acyltransferase family. (560 aa)
	DFA_05343	Protein kinase domain-containing protein. (1088 aa)
	pkaR	Protein kinase A regulatory subunit. (487 aa)
	ubqB	Ubiquitin/ribosomal protein L40 fusion protein. (138 aa)
	pkaC	cAMP-dependent protein kinase. (657 aa)
	DFA_02713	Uncharacterized protein. (941 aa)

Your Current Organism:

Cavenderia fasciculata

NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFA_00182	DFA_01959	F4PXU4	F4PR12	Uncharacterized protein.	VCP-like ATPase.	0.489
DFA_00182	DFA_03857	F4PXU4	F4Q0L2	Uncharacterized protein.	RING-type domain-containing protein.	0.613
DFA_00182	DFA_03985	F4PXU4	F4Q0Z0	Uncharacterized protein.	OS-9-related protein.	0.871
DFA_00182	DFA_08048	F4PXU4	F4Q4W0	Uncharacterized protein.	Cell division control protein.	0.489
DFA_00182	DFA_08081	F4PXU4	F4Q4Z3	Uncharacterized protein.	AAA ATPase domain-containing protein.	0.489
DFA_00182	DFA_08809	F4PXU4	F4Q4G0	Uncharacterized protein.	Putative ATPase.	0.489
DFA_00182	DFA_11517	F4PXU4	F4QDC8	Uncharacterized protein.	Uncharacterized protein.	0.489
DFA_00182	amfr	F4PXU4	F4PQH2	Uncharacterized protein.	Putative ubiquitin-protein ligase.	0.613
DFA_00182	cdcD	F4PXU4	F4PZN6	Uncharacterized protein.	Cell division cycle protein 48; Belongs to the AAA ATPase family.	0.489
DFA_00182	derl1	F4PXU4	F4QEH3	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.682
DFA_01039	DFA_01959	F4PQJ7	F4PR12	Tetratricopeptide-like helical domain-containing protein.	VCP-like ATPase.	0.489
DFA_01039	DFA_03857	F4PQJ7	F4Q0L2	Tetratricopeptide-like helical domain-containing protein.	RING-type domain-containing protein.	0.613
DFA_01039	DFA_03985	F4PQJ7	F4Q0Z0	Tetratricopeptide-like helical domain-containing protein.	OS-9-related protein.	0.871
DFA_01039	DFA_08048	F4PQJ7	F4Q4W0	Tetratricopeptide-like helical domain-containing protein.	Cell division control protein.	0.489
DFA_01039	DFA_08081	F4PQJ7	F4Q4Z3	Tetratricopeptide-like helical domain-containing protein.	AAA ATPase domain-containing protein.	0.489
DFA_01039	DFA_08809	F4PQJ7	F4Q4G0	Tetratricopeptide-like helical domain-containing protein.	Putative ATPase.	0.489
DFA_01039	DFA_11517	F4PQJ7	F4QDC8	Tetratricopeptide-like helical domain-containing protein.	Uncharacterized protein.	0.489
DFA_01039	amfr	F4PQJ7	F4PQH2	Tetratricopeptide-like helical domain-containing protein.	Putative ubiquitin-protein ligase.	0.613
DFA_01039	cdcD	F4PQJ7	F4PZN6	Tetratricopeptide-like helical domain-containing protein.	Cell division cycle protein 48; Belongs to the AAA ATPase family.	0.489
DFA_01039	derl1	F4PQJ7	F4QEH3	Tetratricopeptide-like helical domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.682