STRINGSTRING
pdeE pdeE DFA_03649 DFA_03649 pkaC pkaC pkaR pkaR DFA_05343 DFA_05343 DFA_05748 DFA_05748 kif8 kif8 acaA acaA DFA_04645 DFA_04645 DFA_00653 DFA_00653 tubA tubA psmB6 psmB6 DFA_10126 DFA_10126 tubB tubB DFA_11741 DFA_11741
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pdeEcAMP/cGMP-stimulated cAMP/cGMP phosphodiesterase. (1105 aa)
DFA_03649Ubiquitin domain-containing protein. (2245 aa)
pkaCcAMP-dependent protein kinase. (657 aa)
pkaRProtein kinase A regulatory subunit. (487 aa)
DFA_05343Protein kinase domain-containing protein. (1088 aa)
DFA_05748Protein kinase domain-containing protein. (963 aa)
kif8WD40 repeat-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1522 aa)
acaAAdenylyl cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (1468 aa)
DFA_04645Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (539 aa)
DFA_00653MYND-type domain-containing protein. (508 aa)
tubATubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (461 aa)
psmB6Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family. (214 aa)
DFA_10126KxDL domain-containing protein. (137 aa)
tubBTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (456 aa)
DFA_11741PDCD2_C domain-containing protein. (377 aa)
Your Current Organism:
Cavenderia fasciculata
NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3
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