(8 nodes) Oligonucleotide/oligosaccharide-binding (OB)-fold network (Cavenderia fasciculata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dhx57	DEAD/DEAH box helicase. (1465 aa)
	DFA_00767	Uncharacterized protein. (1597 aa)
	vps13D	Vacuolar protein sorting-associated protein 13 family protein. (4631 aa)
	dhx37	DEAD/DEAH box helicase. (1548 aa)
	dhx15	DEAD/DEAH box helicase. (584 aa)
	dhx35	DEAD/DEAH box helicase. (666 aa)
	dhx8	DEAD/DEAH box helicase. (1152 aa)
	dhx16	DEAD/DEAH box helicase. (1110 aa)

Your Current Organism:

Cavenderia fasciculata

NCBI taxonomy Id: 1054147
Other names: C. fasciculata SH3, Cavenderia fasciculata SH3, Dictyostelium fasciculatum SH3, Dictyostelium fasciculatum strain SH3

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFA_00767	dhx15	F4PTS1	F4Q403	Uncharacterized protein.	DEAD/DEAH box helicase.	0.490
DFA_00767	dhx16	F4PTS1	F4PTL7	Uncharacterized protein.	DEAD/DEAH box helicase.	0.986
DFA_00767	dhx35	F4PTS1	F4PJS4	Uncharacterized protein.	DEAD/DEAH box helicase.	0.665
DFA_00767	dhx37	F4PTS1	F4PZ64	Uncharacterized protein.	DEAD/DEAH box helicase.	0.707
DFA_00767	dhx8	F4PTS1	F4PHR7	Uncharacterized protein.	DEAD/DEAH box helicase.	0.669
DFA_00767	vps13D	F4PTS1	F4PTV7	Uncharacterized protein.	Vacuolar protein sorting-associated protein 13 family protein.	0.648
dhx15	DFA_00767	F4Q403	F4PTS1	DEAD/DEAH box helicase.	Uncharacterized protein.	0.490
dhx15	dhx35	F4Q403	F4PJS4	DEAD/DEAH box helicase.	DEAD/DEAH box helicase.	0.697
dhx15	dhx37	F4Q403	F4PZ64	DEAD/DEAH box helicase.	DEAD/DEAH box helicase.	0.725
dhx15	dhx8	F4Q403	F4PHR7	DEAD/DEAH box helicase.	DEAD/DEAH box helicase.	0.686
dhx15	vps13D	F4Q403	F4PTV7	DEAD/DEAH box helicase.	Vacuolar protein sorting-associated protein 13 family protein.	0.673
dhx16	DFA_00767	F4PTL7	F4PTS1	DEAD/DEAH box helicase.	Uncharacterized protein.	0.986
dhx35	DFA_00767	F4PJS4	F4PTS1	DEAD/DEAH box helicase.	Uncharacterized protein.	0.665
dhx35	dhx15	F4PJS4	F4Q403	DEAD/DEAH box helicase.	DEAD/DEAH box helicase.	0.697
dhx37	DFA_00767	F4PZ64	F4PTS1	DEAD/DEAH box helicase.	Uncharacterized protein.	0.707
dhx37	dhx15	F4PZ64	F4Q403	DEAD/DEAH box helicase.	DEAD/DEAH box helicase.	0.725
dhx8	DFA_00767	F4PHR7	F4PTS1	DEAD/DEAH box helicase.	Uncharacterized protein.	0.669
dhx8	dhx15	F4PHR7	F4Q403	DEAD/DEAH box helicase.	DEAD/DEAH box helicase.	0.686
vps13D	DFA_00767	F4PTV7	F4PTS1	Vacuolar protein sorting-associated protein 13 family protein.	Uncharacterized protein.	0.648
vps13D	dhx15	F4PTV7	F4Q403	Vacuolar protein sorting-associated protein 13 family protein.	DEAD/DEAH box helicase.	0.673