(39 nodes) Membrane protein complex network (Thermoplasmatales archaeon BRNA1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AGI47253.1	ABC-type spermidine/putrescine transport systems, ATPase component. (361 aa)
	AGI47017.1	Signal peptidase I. (269 aa)
	AGI47019.1	ATP synthase H subunit. (116 aa)
	AGI47020.1	Archaeal/vacuolar-type H+-ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family. (711 aa)
	AGI47021.1	ATP synthase subunit C. (80 aa)
	atpE	Archaeal/vacuolar-type H+-ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane. (185 aa)
	atpC	ATP synthase A1, C subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (350 aa)
	atpA	Archaeal/vacuolar-type H+-ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (553 aa)
	atpB	Archaeal/vacuolar-type H+-ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit. (460 aa)
	atpD	H(+)-transporting ATP synthase, vacuolar type, subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (212 aa)
	AGI47139.1	Putative cobalamin binding protein. (209 aa)
	AGI47152.1	Putative transcriptional regulator, contains C-terminal CBS domains. (152 aa)
	AGI47176.1	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component. (244 aa)
	AGI47225.1	NADH:ubiquinone oxidoreductase 27 kD subunit. (161 aa)
	AGI47226.1	NADH:ubiquinone oxidoreductase 49 kD subunit 7. (428 aa)
	AGI47244.1	Hypothetical protein. (163 aa)
	AGI47251.1	ABC-type spermidine/putrescine transport systems, ATPase component. (310 aa)
	AGI47252.1	TOBE domain protein. (64 aa)
	AGI47309.1	Dimethylamine corrinoid protein. (213 aa)
	hel308	Superfamily II helicase; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks. (760 aa)
	AGI47825.1	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component. (266 aa)
	AGI47884.1	ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA. (265 aa)
	AGI47891.1	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component. (225 aa)
	AGI48025.1	Hypothetical protein. (154 aa)
	AGI48033.1	Hypothetical protein. (320 aa)
	AGI48084.1	Putative cobalamin binding protein. (212 aa)
	AGI48090.1	Trimethylamine corrinoid protein. (216 aa)
	AGI48093.1	Dimethylamine corrinoid protein. (213 aa)
	AGI48166.1	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component. (280 aa)
	AGI48174.1	ABC-2 type transporter. (251 aa)
	AGI48180.1	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component. (289 aa)
	AGI48182.1	ABC-2 type transporter. (253 aa)
	AGI48206.1	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (383 aa)
	AGI48207.1	Cobalt transport protein ATP-binding subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (366 aa)
	AGI48208.1	ABC-type cobalt transport system, permease component CbiQ-related transporter. (220 aa)
	AGI48209.1	ABC-type cobalt transport system, periplasmic component. (108 aa)
	AGI48210.1	Cobalamin biosynthesis protein CbiM. (209 aa)
	AGI48292.1	Putative membrane protein. (232 aa)
	ftsY	Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (374 aa)

Your Current Organism:

Thermoplasmatales archaeon BRNA1

NCBI taxonomy Id: 1054217
Other names: T. archaeon BRNA1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGI47017.1	AGI47020.1	TALC_00002	TALC_00005	Signal peptidase I.	Archaeal/vacuolar-type H+-ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	0.672
AGI47017.1	AGI47021.1	TALC_00002	TALC_00006	Signal peptidase I.	ATP synthase subunit C.	0.588
AGI47017.1	AGI47244.1	TALC_00002	TALC_00230	Signal peptidase I.	Hypothetical protein.	0.900
AGI47017.1	AGI48292.1	TALC_00002	TALC_01310	Signal peptidase I.	Putative membrane protein.	0.675
AGI47017.1	atpA	TALC_00002	TALC_00010	Signal peptidase I.	Archaeal/vacuolar-type H+-ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.501
AGI47017.1	atpB	TALC_00002	TALC_00011	Signal peptidase I.	Archaeal/vacuolar-type H+-ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.	0.516
AGI47017.1	atpC	TALC_00002	TALC_00008	Signal peptidase I.	ATP synthase A1, C subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.772
AGI47017.1	atpD	TALC_00002	TALC_00012	Signal peptidase I.	H(+)-transporting ATP synthase, vacuolar type, subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.603
AGI47017.1	atpE	TALC_00002	TALC_00007	Signal peptidase I.	Archaeal/vacuolar-type H+-ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.567
AGI47019.1	AGI47020.1	TALC_00004	TALC_00005	ATP synthase H subunit.	Archaeal/vacuolar-type H+-ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	0.997
AGI47019.1	AGI47021.1	TALC_00004	TALC_00006	ATP synthase H subunit.	ATP synthase subunit C.	0.987
AGI47019.1	atpA	TALC_00004	TALC_00010	ATP synthase H subunit.	Archaeal/vacuolar-type H+-ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.985
AGI47019.1	atpB	TALC_00004	TALC_00011	ATP synthase H subunit.	Archaeal/vacuolar-type H+-ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.	0.979
AGI47019.1	atpC	TALC_00004	TALC_00008	ATP synthase H subunit.	ATP synthase A1, C subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.996
AGI47019.1	atpD	TALC_00004	TALC_00012	ATP synthase H subunit.	H(+)-transporting ATP synthase, vacuolar type, subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.981
AGI47019.1	atpE	TALC_00004	TALC_00007	ATP synthase H subunit.	Archaeal/vacuolar-type H+-ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.996
AGI47020.1	AGI47017.1	TALC_00005	TALC_00002	Archaeal/vacuolar-type H+-ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	Signal peptidase I.	0.672
AGI47020.1	AGI47019.1	TALC_00005	TALC_00004	Archaeal/vacuolar-type H+-ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	ATP synthase H subunit.	0.997
AGI47020.1	AGI47021.1	TALC_00005	TALC_00006	Archaeal/vacuolar-type H+-ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	ATP synthase subunit C.	0.999
AGI47020.1	atpA	TALC_00005	TALC_00010	Archaeal/vacuolar-type H+-ATPase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	Archaeal/vacuolar-type H+-ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.999