STRINGSTRING
ABD09450.1 ABD09450.1 ABD09451.1 ABD09451.1 ABD09452.1 ABD09452.1 ABD09475.1 ABD09475.1 ABD09477.1 ABD09477.1 ABD09704.1 ABD09704.1 ABD09814.1 ABD09814.1 ABD09938.1 ABD09938.1 ABD09939.1 ABD09939.1 sucC sucC sucD sucD ABD10062.1 ABD10062.1 ABD10063.1 ABD10063.1 ABD10064.1 ABD10064.1 ABD10065.1 ABD10065.1 ABD10321.1 ABD10321.1 ABD10606.1 ABD10606.1 ABD10654.1 ABD10654.1 ABD10689.1 ABD10689.1 ABD11271.1 ABD11271.1 ABD11401.1 ABD11401.1 ABD11572.1 ABD11572.1 ABD11853.1 ABD11853.1 ABD11854.1 ABD11854.1 ABD11855.1 ABD11855.1 ABD12144.1 ABD12144.1 ABD12414.1 ABD12414.1 ABD12491.1 ABD12491.1 ABD12492.1 ABD12492.1 ABD12605.1 ABD12605.1 mdh mdh ABD12819.1 ABD12819.1 ABD12820.1 ABD12820.1 ABD12821.1 ABD12821.1 ABD13015.1 ABD13015.1 ABD13099.1 ABD13099.1 ABD13102.1 ABD13102.1 fumC fumC pckG pckG ABD13376.1 ABD13376.1 ABD13819.1 ABD13819.1 ABD13820.1 ABD13820.1 ABD13835.1 ABD13835.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABD09450.1Dehydrogenase subunit. (524 aa)
ABD09451.1Transketolase. (353 aa)
ABD09452.1Pyruvate dehydrogenase. (399 aa)
ABD09475.1Citrate synthase; Belongs to the citrate synthase family. (369 aa)
ABD09477.1Citrate synthase; Belongs to the citrate synthase family. (455 aa)
ABD09704.1Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1136 aa)
ABD09814.1Malic enzyme-like. (414 aa)
ABD09938.1Thiamine pyrophosphate enzyme-like TPP-binding. (353 aa)
ABD09939.1Pyruvate flavodoxin/ferredoxin oxidoreductase-like. (628 aa)
sucCsuccinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (388 aa)
sucDsuccinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
ABD10062.1Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (232 aa)
ABD10063.1Succinate dehydrogenase subunit A. (584 aa)
ABD10064.1Succinate dehydrogenase subunit D. (153 aa)
ABD10065.1Succinate dehydrogenase subunit C. (131 aa)
ABD10321.1Pyridine nucleotide-disulphide oxidoreductase dimerisation region. (493 aa)
ABD10606.1Malate synthase A; Belongs to the malate synthase family. (541 aa)
ABD10654.1Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (897 aa)
ABD10689.1Aconitase. (927 aa)
ABD11271.1Pyruvate dehydrogenase complex dehydrogenase (E1) component-like. (915 aa)
ABD11401.1Pyruvate:ferredoxin (flavodoxin) oxidoreductase. (1195 aa)
ABD11572.1Isocitrate dehydrogenase, NADP-dependent; Belongs to the monomeric-type IDH family. (739 aa)
ABD11853.1Dehydrogenase subunit. (430 aa)
ABD11854.1Transketolase. (329 aa)
ABD11855.1Pyruvate dehydrogenase. (388 aa)
ABD12144.1Pyruvate dehydrogenase. (417 aa)
ABD12414.12-oxo-acid dehydrogenase E1 component, homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (945 aa)
ABD12491.1Dihydrolipoamide dehydrogenase. (460 aa)
ABD12492.12-oxoglutarate dehydrogenase E2 component. (487 aa)
ABD12605.1Pyruvate ferredoxin oxidoreductase, gamma subunit. (200 aa)
mdhMalate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. (329 aa)
ABD12819.1Succinate dehydrogenase subunit C. (246 aa)
ABD12820.1Succinate dehydrogenase subunit A. (645 aa)
ABD12821.1Succinate dehydrogenase subunit B. (248 aa)
ABD13015.1Acetyl-coenzyme A synthetase. (667 aa)
ABD13099.12-oxoglutarate dehydrogenase E1 component. (1244 aa)
ABD13102.1Malate dehydrogenase. (408 aa)
fumCFumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (463 aa)
pckGPhosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. (609 aa)
ABD13376.1AMP-dependent synthetase and ligase. (569 aa)
ABD13819.1Thiamine pyrophosphate enzyme-like TPP-binding. (359 aa)
ABD13820.1Pyruvate flavodoxin/ferredoxin oxidoreductase-like. (667 aa)
ABD13835.1Pyruvate carboxyltransferase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (398 aa)
Your Current Organism:
Frankia casuarinae
NCBI taxonomy Id: 106370
Other names: CECT 9043, DSM 45818, F. casuarinae, Frankia casuarinae Nouioui et al. 2016, Frankia sp. BR, Frankia sp. CcI3, Frankia sp. Cg70.9, Frankia sp. Thr, strain CcI3
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