Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABD09573.1 | ABD12369.1 | Francci3_0181 | Francci3_3012 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Glutamate synthase (NADH) small subunit. | 0.900 |
| ABD09573.1 | ABD12370.1 | Francci3_0181 | Francci3_3013 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Glutamate synthase (NADH) large subunit. | 0.930 |
| ABD09650.1 | ABD11444.1 | Francci3_0262 | Francci3_2071 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.914 |
| ABD09650.1 | ABD12370.1 | Francci3_0262 | Francci3_3013 | Aspartate kinase; Belongs to the aspartokinase family. | Glutamate synthase (NADH) large subunit. | 0.587 |
| ABD09650.1 | ABD13403.1 | Francci3_0262 | Francci3_4053 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate decarboxylase. | 0.473 |
| ABD09650.1 | asd | Francci3_0262 | Francci3_0261 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.993 |
| ABD09650.1 | dapA | Francci3_0262 | Francci3_3544 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.838 |
| ABD09650.1 | dapB | Francci3_0262 | Francci3_3553 | Aspartate kinase; Belongs to the aspartokinase family. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.782 |
| ABD09650.1 | dapF | Francci3_0262 | Francci3_3514 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.688 |
| ABD09650.1 | lysA | Francci3_0262 | Francci3_3726 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.706 |
| ABD09820.1 | ABD09821.1 | Francci3_0433 | Francci3_0434 | Shikimate dehydrogenase. | 3-dehydroquinate synthase. | 0.938 |
| ABD09820.1 | ABD12370.1 | Francci3_0433 | Francci3_3013 | Shikimate dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.569 |
| ABD09820.1 | ABD12568.1 | Francci3_0433 | Francci3_3211 | Shikimate dehydrogenase. | Shikimate dehydrogenase. | 0.932 |
| ABD09820.1 | aroA | Francci3_0433 | Francci3_3771 | Shikimate dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.784 |
| ABD09820.1 | aroB | Francci3_0433 | Francci3_3207 | Shikimate dehydrogenase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.669 |
| ABD09820.1 | aroC | Francci3_0433 | Francci3_3209 | Shikimate dehydrogenase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.869 |
| ABD09820.1 | aroK | Francci3_0433 | Francci3_3208 | Shikimate dehydrogenase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.969 |
| ABD09820.1 | aroQ | Francci3_0433 | Francci3_0428 | Shikimate dehydrogenase. | 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.750 |
| ABD09821.1 | ABD09820.1 | Francci3_0434 | Francci3_0433 | 3-dehydroquinate synthase. | Shikimate dehydrogenase. | 0.938 |
| ABD09821.1 | ABD11831.1 | Francci3_0434 | Francci3_2464 | 3-dehydroquinate synthase. | Chorismate mutase. | 0.524 |
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