56 items (Naumovozyma castellii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NCAS0A05630	Uncharacterized protein. (602 aa)
	NCAS0A05800	Reverse transcriptase Ty1/copia-type domain-containing protein. (319 aa)
	NCAS0A05840	Uncharacterized protein. (307 aa)
	NCAS0A07930	RNA polymerase II transcription factor B subunit 3; Acts as component of the general transcription and DNA repair factor IIH (TFIIH or factor B), which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA. (327 aa)
	NCAS0A08310	Uncharacterized protein. (424 aa)
	NCAS0A08380	Uncharacterized protein. (1079 aa)
	NCAS0A08710	AAA domain-containing protein. (321 aa)
	NCAS0A09640	Uncharacterized protein. (501 aa)
	NCAS0A09890	AAA domain-containing protein. (336 aa)
	NCAS0A10500	WD_REPEATS_REGION domain-containing protein. (478 aa)
	NCAS0A10960	AAA domain-containing protein. (356 aa)
	NCAS0A11040	Uncharacterized protein. (338 aa)
	NCAS0A12040	S1 domain-containing protein. (171 aa)
	NCAS0A12160	Uncharacterized protein. (858 aa)
	NCAS0A12300	AAA domain-containing protein. (350 aa)
	NCAS0A13020	Uncharacterized protein. (239 aa)
	NCAS0A13900	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1716 aa)
	NCAS0A14650	CYCLIN domain-containing protein; Belongs to the cyclin family. (374 aa)
	NCAS0A15280	Uncharacterized protein. (157 aa)
	NCAS0B04860	Helicase ATP-binding domain-containing protein. (774 aa)
	NCAS0B05650	Uncharacterized protein. (292 aa)
	NCAS0B05760	Integrase catalytic domain-containing protein. (177 aa)
	NCAS0B06000	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (312 aa)
	NCAS0B04150	Uncharacterized protein. (72 aa)
	NCAS0B08160	RPOL4c domain-containing protein. (246 aa)
	NCAS0B01110	Zds_C domain-containing protein. (993 aa)
	NCAS0B01320	Replication factor C subunit 1. (871 aa)
	NCAS0B01380	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (147 aa)
	NCAS0B01680	Uncharacterized protein. (70 aa)
	NCAS0C01390	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (516 aa)
	NCAS0C02940	Ubiquitin-like domain-containing protein. (152 aa)
	NCAS0C04480	RING-type domain-containing protein. (109 aa)
	NCAS0C04500	Uncharacterized protein. (279 aa)
	NCAS0C05600	RT_RNaseH_2 domain-containing protein. (445 aa)
	NCAS0C05850	Uncharacterized protein. (388 aa)
	NCAS0D02120	RNA_pol_L_2 domain-containing protein. (122 aa)
	NCAS0D02390	Uncharacterized protein; Belongs to the peptidase C19 family. (1211 aa)
	NCAS0D02890	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (485 aa)
	NCAS0D03800	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (122 aa)
	NCAS0D00470	Uncharacterized protein. (70 aa)
	NCAS0E00690	Reverse transcriptase Ty1/copia-type domain-containing protein. (247 aa)
	NCAS0E01830	RPOLD domain-containing protein. (318 aa)
	NCAS0E03770	PPIase cyclophilin-type domain-containing protein. (371 aa)
	NCAS0F02180	U-box domain-containing protein. (172 aa)
	NCAS0G00290	Uncharacterized protein. (837 aa)
	NCAS0G02330	Integrase catalytic domain-containing protein. (657 aa)
	NCAS0G02340	Reverse transcriptase domain-containing protein. (195 aa)
	NCAS0H00470	Integrase catalytic domain-containing protein. (350 aa)
	NCAS0H01700	Uncharacterized protein. (631 aa)
	NCAS0H02100	USP domain-containing protein; Belongs to the peptidase C19 family. (1269 aa)
	NCAS0H02320	ATPase_AAA_core domain-containing protein. (790 aa)
	NCAS0H02400	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1224 aa)
	NCAS0H03510	Uncharacterized protein. (1220 aa)
	NCAS0I02370	Uncharacterized protein. (215 aa)
	NCAS0J01120	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (613 aa)
	NCAS0A05290	Uncharacterized protein. (926 aa)

Your Current Organism:

Naumovozyma castellii

NCBI taxonomy Id: 1064592
Other names: N. castellii CBS 4309, Naumovozyma castellii CBS 4309

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NCAS0A05290	NCAS0C04500	G0V6J4	G0VD78	Uncharacterized protein.	Uncharacterized protein.	0.521
NCAS0A05290	NCAS0J01120	G0V6J4	G0VKQ3	Uncharacterized protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.474
NCAS0A05630	NCAS0A05840	G0V6M5	G0V6P6	Uncharacterized protein.	Uncharacterized protein.	0.666
NCAS0A05630	NCAS0A12040	G0V6M5	G0V8G4	Uncharacterized protein.	S1 domain-containing protein.	0.571
NCAS0A05630	NCAS0A13900	G0V6M5	G0V8Z9	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.823
NCAS0A05630	NCAS0A15280	G0V6M5	G0V9D5	Uncharacterized protein.	Uncharacterized protein.	0.571
NCAS0A05630	NCAS0B01380	G0V6M5	G0VB98	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.571
NCAS0A05630	NCAS0B01680	G0V6M5	G0VBC6	Uncharacterized protein.	Uncharacterized protein.	0.571
NCAS0A05630	NCAS0B08160	G0V6M5	G0VAH0	Uncharacterized protein.	RPOL4c domain-containing protein.	0.571
NCAS0A05630	NCAS0D00470	G0V6M5	G0VF09	Uncharacterized protein.	Uncharacterized protein.	0.571
NCAS0A05630	NCAS0D02120	G0V6M5	G0VE03	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.576
NCAS0A05630	NCAS0D03800	G0V6M5	G0VEH0	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.613
NCAS0A05630	NCAS0E01830	G0V6M5	G0VFI7	Uncharacterized protein.	RPOLD domain-containing protein.	0.610
NCAS0A05630	NCAS0H02400	G0V6M5	G0VJ71	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.591
NCAS0A05630	NCAS0I02370	G0V6M5	G0VK71	Uncharacterized protein.	Uncharacterized protein.	0.789
NCAS0A05800	NCAS0C04500	G0V6P2	G0VD78	Reverse transcriptase Ty1/copia-type domain-containing protein.	Uncharacterized protein.	0.521
NCAS0A05800	NCAS0E00690	G0V6P2	G0VF74	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.465
NCAS0A05800	NCAS0J01120	G0V6P2	G0VKQ3	Reverse transcriptase Ty1/copia-type domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.467
NCAS0A05840	NCAS0A05630	G0V6P6	G0V6M5	Uncharacterized protein.	Uncharacterized protein.	0.666
NCAS0A05840	NCAS0A07930	G0V6P6	G0V7A3	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 3; Acts as component of the general transcription and DNA repair factor IIH (TFIIH or factor B), which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA.	0.714