(13 nodes) Mixed, incl. CXC domain, and Polycomb protein, VEFS-Box network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_038395	Uncharacterized protein. (1593 aa)
	C1H46_030261	Uncharacterized protein. (803 aa)
	C1H46_029997	Uncharacterized protein. (518 aa)
	C1H46_028913	VEFS-Box domain-containing protein. (618 aa)
	C1H46_024190	VEFS-Box domain-containing protein. (671 aa)
	C1H46_021714	Uncharacterized protein. (873 aa)
	C1H46_018607	WD_REPEATS_REGION domain-containing protein. (371 aa)
	C1H46_015270	Uncharacterized protein. (1600 aa)
	C1H46_014039	Uncharacterized protein. (786 aa)
	C1H46_005793	VEFS-Box domain-containing protein. (473 aa)
	C1H46_005442	WD_REPEATS_REGION domain-containing protein. (422 aa)
	C1H46_003961	WD_REPEATS_REGION domain-containing protein. (281 aa)
	C1H46_002555	Uncharacterized protein. (114 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_002555	C1H46_003961	A0A540NLK9	A0A540NH72	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.955
C1H46_002555	C1H46_005442	A0A540NLK9	A0A540NDD9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.955
C1H46_002555	C1H46_005793	A0A540NLK9	A0A540NC46	Uncharacterized protein.	VEFS-Box domain-containing protein.	0.963
C1H46_002555	C1H46_014039	A0A540NLK9	A0A540MNI0	Uncharacterized protein.	Uncharacterized protein.	0.854
C1H46_002555	C1H46_015270	A0A540NLK9	A0A540MK42	Uncharacterized protein.	Uncharacterized protein.	0.962
C1H46_002555	C1H46_018607	A0A540NLK9	A0A540MAR7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.984
C1H46_002555	C1H46_021714	A0A540NLK9	A0A540M1W2	Uncharacterized protein.	Uncharacterized protein.	0.854
C1H46_002555	C1H46_024190	A0A540NLK9	A0A540LUU6	Uncharacterized protein.	VEFS-Box domain-containing protein.	0.963
C1H46_002555	C1H46_028913	A0A540NLK9	A0A540LGE6	Uncharacterized protein.	VEFS-Box domain-containing protein.	0.963
C1H46_002555	C1H46_029997	A0A540NLK9	A0A540LDA4	Uncharacterized protein.	Uncharacterized protein.	0.955
C1H46_002555	C1H46_030261	A0A540NLK9	A0A540LCH7	Uncharacterized protein.	Uncharacterized protein.	0.854
C1H46_002555	C1H46_038395	A0A540NLK9	A0A540KPC7	Uncharacterized protein.	Uncharacterized protein.	0.962
C1H46_003961	C1H46_002555	A0A540NH72	A0A540NLK9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.955
C1H46_003961	C1H46_005793	A0A540NH72	A0A540NC46	WD_REPEATS_REGION domain-containing protein.	VEFS-Box domain-containing protein.	0.941
C1H46_003961	C1H46_014039	A0A540NH72	A0A540MNI0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.920
C1H46_003961	C1H46_015270	A0A540NH72	A0A540MK42	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.972
C1H46_003961	C1H46_018607	A0A540NH72	A0A540MAR7	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.984
C1H46_003961	C1H46_021714	A0A540NH72	A0A540M1W2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.920
C1H46_003961	C1H46_024190	A0A540NH72	A0A540LUU6	WD_REPEATS_REGION domain-containing protein.	VEFS-Box domain-containing protein.	0.941
C1H46_003961	C1H46_028913	A0A540NH72	A0A540LGE6	WD_REPEATS_REGION domain-containing protein.	VEFS-Box domain-containing protein.	0.941