(33 nodes) SUMOylation of SUMOylation proteins network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_045195	Uncharacterized protein. (170 aa)
	C1H46_043074	Uncharacterized protein. (151 aa)
	C1H46_041593	Uncharacterized protein. (193 aa)
	C1H46_041592	Uncharacterized protein. (166 aa)
	GATC	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family. (143 aa)
	C1H46_039493	Nuclear pore protein. (863 aa)
	C1H46_038470	MENTAL domain-containing protein. (1071 aa)
	C1H46_037918	C2H2-type domain-containing protein. (444 aa)
	C1H46_034877	Uncharacterized protein. (203 aa)
	C1H46_031069	MENTAL domain-containing protein. (597 aa)
	C1H46_030347	Uncharacterized protein. (602 aa)
	C1H46_024647	Uncharacterized protein. (176 aa)
	C1H46_023985	Uncharacterized protein. (1467 aa)
	C1H46_018621	C2H2-type domain-containing protein. (442 aa)
	C1H46_017633	Nup54 domain-containing protein. (398 aa)
	C1H46_016909	Uncharacterized protein. (158 aa)
	C1H46_015986	Uncharacterized protein. (320 aa)
	C1H46_014667	Uncharacterized protein. (128 aa)
	C1H46_012560	Uncharacterized protein. (188 aa)
	C1H46_012098	Uncharacterized protein. (87 aa)
	C1H46_012097	Uncharacterized protein. (1863 aa)
	C1H46_011972	Uncharacterized protein. (984 aa)
	C1H46_011395	Uncharacterized protein. (1952 aa)
	C1H46_009377	RRM Nup35-type domain-containing protein. (124 aa)
	C1H46_008202	Uncharacterized protein. (119 aa)
	C1H46_006474	Uncharacterized protein. (149 aa)
	C1H46_005655	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1085 aa)
	C1H46_005196	Uncharacterized protein. (513 aa)
	C1H46_004665	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1074 aa)
	C1H46_002629	Nuclear pore protein. (863 aa)
	C1H46_002153	Nuclear pore complex protein NUP35. (356 aa)
	C1H46_002002	DUF5311 domain-containing protein. (267 aa)
	C1H46_001997	Uncharacterized protein. (1480 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_001997	C1H46_002153	A0A540NMV0	A0A540NMG4	Uncharacterized protein.	Nuclear pore complex protein NUP35.	0.893
C1H46_001997	C1H46_002629	A0A540NMV0	A0A540NL75	Uncharacterized protein.	Nuclear pore protein.	0.947
C1H46_001997	C1H46_004665	A0A540NMV0	A0A540NFB1	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.988
C1H46_001997	C1H46_005196	A0A540NMV0	A0A540NE08	Uncharacterized protein.	Uncharacterized protein.	0.909
C1H46_001997	C1H46_005655	A0A540NMV0	A0A540NCB4	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.988
C1H46_001997	C1H46_006474	A0A540NMV0	A0A540NA63	Uncharacterized protein.	Uncharacterized protein.	0.808
C1H46_001997	C1H46_008202	A0A540NMV0	A0A540N505	Uncharacterized protein.	Uncharacterized protein.	0.893
C1H46_001997	C1H46_009377	A0A540NMV0	A0A540N1T6	Uncharacterized protein.	RRM Nup35-type domain-containing protein.	0.893
C1H46_001997	C1H46_011395	A0A540NMV0	A0A540MW65	Uncharacterized protein.	Uncharacterized protein.	0.937
C1H46_001997	C1H46_011972	A0A540NMV0	A0A540MUG6	Uncharacterized protein.	Uncharacterized protein.	0.957
C1H46_001997	C1H46_012097	A0A540NMV0	A0A540MU70	Uncharacterized protein.	Uncharacterized protein.	0.981
C1H46_001997	C1H46_012098	A0A540NMV0	A0A540MU65	Uncharacterized protein.	Uncharacterized protein.	0.971
C1H46_001997	C1H46_012560	A0A540NMV0	A0A540MTR4	Uncharacterized protein.	Uncharacterized protein.	0.903
C1H46_001997	C1H46_014667	A0A540NMV0	A0A540MLT4	Uncharacterized protein.	Uncharacterized protein.	0.808
C1H46_001997	C1H46_015986	A0A540NMV0	A0A540MHX2	Uncharacterized protein.	Uncharacterized protein.	0.909
C1H46_001997	C1H46_017633	A0A540NMV0	A0A540MDB4	Uncharacterized protein.	Nup54 domain-containing protein.	0.909
C1H46_001997	C1H46_018621	A0A540NMV0	A0A540MB45	Uncharacterized protein.	C2H2-type domain-containing protein.	0.942
C1H46_001997	C1H46_023985	A0A540NMV0	A0A540LVN3	Uncharacterized protein.	Uncharacterized protein.	0.987
C1H46_001997	C1H46_024647	A0A540NMV0	A0A540LTD0	Uncharacterized protein.	Uncharacterized protein.	0.937
C1H46_001997	C1H46_030347	A0A540NMV0	A0A540LC76	Uncharacterized protein.	Uncharacterized protein.	0.947