(15 nodes) Thaumatin family, and Gamma interferon inducible lysosomal thiol reductase GILT network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_042817	Uncharacterized protein. (246 aa)
	C1H46_041273	Uncharacterized protein. (296 aa)
	C1H46_037991	Uncharacterized protein. (263 aa)
	C1H46_029929	MADS-box domain-containing protein. (312 aa)
	C1H46_028564	Uncharacterized protein. (204 aa)
	C1H46_027818	Uncharacterized protein. (244 aa)
	C1H46_023083	Uncharacterized protein. (179 aa)
	C1H46_022267	Uncharacterized protein. (102 aa)
	C1H46_017061	Uncharacterized protein. (134 aa)
	C1H46_003738	Uncharacterized protein. (142 aa)
	C1H46_003740	Uncharacterized protein. (196 aa)
	C1H46_003742	Uncharacterized protein. (135 aa)
	C1H46_003736	Uncharacterized protein. (159 aa)
	C1H46_001858	Uncharacterized protein. (95 aa)
	C1H46_001857	Uncharacterized protein. (237 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_001857	C1H46_001858	A0A540NNP2	A0A540NNN3	Uncharacterized protein.	Uncharacterized protein.	0.473
C1H46_001858	C1H46_001857	A0A540NNN3	A0A540NNP2	Uncharacterized protein.	Uncharacterized protein.	0.473
C1H46_001858	C1H46_003738	A0A540NNN3	A0A540NHV0	Uncharacterized protein.	Uncharacterized protein.	0.464
C1H46_001858	C1H46_017061	A0A540NNN3	A0A540MEZ4	Uncharacterized protein.	Uncharacterized protein.	0.495
C1H46_001858	C1H46_028564	A0A540NNN3	A0A540LHD6	Uncharacterized protein.	Uncharacterized protein.	0.516
C1H46_003736	C1H46_017061	A0A540NJ28	A0A540MEZ4	Uncharacterized protein.	Uncharacterized protein.	0.518
C1H46_003738	C1H46_001858	A0A540NHV0	A0A540NNN3	Uncharacterized protein.	Uncharacterized protein.	0.464
C1H46_003740	C1H46_017061	A0A540NHV3	A0A540MEZ4	Uncharacterized protein.	Uncharacterized protein.	0.538
C1H46_003742	C1H46_017061	A0A540NI02	A0A540MEZ4	Uncharacterized protein.	Uncharacterized protein.	0.527
C1H46_017061	C1H46_001858	A0A540MEZ4	A0A540NNN3	Uncharacterized protein.	Uncharacterized protein.	0.495
C1H46_017061	C1H46_003736	A0A540MEZ4	A0A540NJ28	Uncharacterized protein.	Uncharacterized protein.	0.518
C1H46_017061	C1H46_003740	A0A540MEZ4	A0A540NHV3	Uncharacterized protein.	Uncharacterized protein.	0.538
C1H46_017061	C1H46_003742	A0A540MEZ4	A0A540NI02	Uncharacterized protein.	Uncharacterized protein.	0.527
C1H46_028564	C1H46_001858	A0A540LHD6	A0A540NNN3	Uncharacterized protein.	Uncharacterized protein.	0.516