(6 nodes) Mixed, incl. Utp14 protein, and UTP15 C terminal network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_040389	Uncharacterized protein. (294 aa)
	C1H46_030296	Uncharacterized protein. (895 aa)
	C1H46_024443	WD_REPEATS_REGION domain-containing protein. (549 aa)
	C1H46_013537	Uncharacterized protein. (93 aa)
	C1H46_000518	CBF domain-containing protein. (647 aa)
	C1H46_000717	WD_REPEATS_REGION domain-containing protein. (561 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_000518	C1H46_000717	A0A540NS90	A0A540NT12	CBF domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
C1H46_000518	C1H46_013537	A0A540NS90	A0A540MQE1	CBF domain-containing protein.	Uncharacterized protein.	0.993
C1H46_000518	C1H46_024443	A0A540NS90	A0A540LUN2	CBF domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
C1H46_000518	C1H46_030296	A0A540NS90	A0A540LCJ9	CBF domain-containing protein.	Uncharacterized protein.	0.993
C1H46_000518	C1H46_040389	A0A540NS90	A0A540KIM6	CBF domain-containing protein.	Uncharacterized protein.	0.994
C1H46_000717	C1H46_000518	A0A540NT12	A0A540NS90	WD_REPEATS_REGION domain-containing protein.	CBF domain-containing protein.	0.999
C1H46_000717	C1H46_013537	A0A540NT12	A0A540MQE1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998
C1H46_000717	C1H46_024443	A0A540NT12	A0A540LUN2	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
C1H46_000717	C1H46_030296	A0A540NT12	A0A540LCJ9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
C1H46_000717	C1H46_040389	A0A540NT12	A0A540KIM6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998
C1H46_013537	C1H46_000518	A0A540MQE1	A0A540NS90	Uncharacterized protein.	CBF domain-containing protein.	0.993
C1H46_013537	C1H46_000717	A0A540MQE1	A0A540NT12	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998
C1H46_013537	C1H46_024443	A0A540MQE1	A0A540LUN2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.993
C1H46_013537	C1H46_030296	A0A540MQE1	A0A540LCJ9	Uncharacterized protein.	Uncharacterized protein.	0.995
C1H46_013537	C1H46_040389	A0A540MQE1	A0A540KIM6	Uncharacterized protein.	Uncharacterized protein.	0.996
C1H46_024443	C1H46_000518	A0A540LUN2	A0A540NS90	WD_REPEATS_REGION domain-containing protein.	CBF domain-containing protein.	0.998
C1H46_024443	C1H46_000717	A0A540LUN2	A0A540NT12	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
C1H46_024443	C1H46_013537	A0A540LUN2	A0A540MQE1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.993
C1H46_024443	C1H46_030296	A0A540LUN2	A0A540LCJ9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.989
C1H46_024443	C1H46_040389	A0A540LUN2	A0A540KIM6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.992