(26 nodes) TRAPP complex network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_045708	Uncharacterized protein. (57 aa)
	C1H46_042578	Uncharacterized protein. (143 aa)
	C1H46_042437	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (186 aa)
	C1H46_040839	Uncharacterized protein. (1243 aa)
	C1H46_039139	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (169 aa)
	C1H46_035606	Uncharacterized protein. (1259 aa)
	C1H46_032840	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (169 aa)
	C1H46_031553	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily. (249 aa)
	C1H46_028304	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily. (194 aa)
	C1H46_026385	Uncharacterized protein. (871 aa)
	C1H46_025561	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (186 aa)
	C1H46_022968	Uncharacterized protein. (108 aa)
	C1H46_022964	Uncharacterized protein. (164 aa)
	C1H46_022967	Uncharacterized protein. (77 aa)
	C1H46_022638	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (141 aa)
	C1H46_021053	Uncharacterized protein. (1570 aa)
	C1H46_020259	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (141 aa)
	C1H46_019683	Uncharacterized protein. (1202 aa)
	C1H46_018337	Uncharacterized protein. (56 aa)
	C1H46_016475	Uncharacterized protein. (97 aa)
	C1H46_013719	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (135 aa)
	C1H46_013350	Uncharacterized protein. (149 aa)
	C1H46_007910	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (141 aa)
	C1H46_007564	Uncharacterized protein. (184 aa)
	C1H46_007011	Uncharacterized protein. (304 aa)
	C1H46_006379	Uncharacterized protein. (817 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_006379	C1H46_007011	A0A540NA90	A0A540N8H7	Uncharacterized protein.	Uncharacterized protein.	0.988
C1H46_006379	C1H46_007564	A0A540NA90	A0A540N722	Uncharacterized protein.	Uncharacterized protein.	0.908
C1H46_006379	C1H46_007910	A0A540NA90	A0A540N5T7	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.980
C1H46_006379	C1H46_013350	A0A540NA90	A0A540MS53	Uncharacterized protein.	Uncharacterized protein.	0.866
C1H46_006379	C1H46_013719	A0A540NA90	A0A540MQN0	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.980
C1H46_006379	C1H46_016475	A0A540NA90	A0A540MGR3	Uncharacterized protein.	Uncharacterized protein.	0.866
C1H46_006379	C1H46_018337	A0A540NA90	A0A540MB78	Uncharacterized protein.	Uncharacterized protein.	0.988
C1H46_006379	C1H46_019683	A0A540NA90	A0A540M7L1	Uncharacterized protein.	Uncharacterized protein.	0.908
C1H46_006379	C1H46_020259	A0A540NA90	A0A540M5N6	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.980
C1H46_006379	C1H46_021053	A0A540NA90	A0A540M3H3	Uncharacterized protein.	Uncharacterized protein.	0.996
C1H46_006379	C1H46_022638	A0A540NA90	A0A540LZG0	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.980
C1H46_006379	C1H46_022964	A0A540NA90	A0A540LYS0	Uncharacterized protein.	Uncharacterized protein.	0.985
C1H46_006379	C1H46_022967	A0A540NA90	A0A540LYX6	Uncharacterized protein.	Uncharacterized protein.	0.985
C1H46_006379	C1H46_022968	A0A540NA90	A0A540LY88	Uncharacterized protein.	Uncharacterized protein.	0.985
C1H46_006379	C1H46_025561	A0A540NA90	A0A540LQW0	Uncharacterized protein.	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.988
C1H46_006379	C1H46_028304	A0A540NA90	A0A540LI36	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.	0.988
C1H46_006379	C1H46_031553	A0A540NA90	A0A540L9A0	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.	0.988
C1H46_006379	C1H46_032840	A0A540NA90	A0A540L5R5	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.988
C1H46_006379	C1H46_035606	A0A540NA90	A0A540KX84	Uncharacterized protein.	Uncharacterized protein.	0.866
C1H46_006379	C1H46_039139	A0A540NA90	A0A540KM80	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.988