(6 nodes) Mixed, incl. Protein import into peroxisome membrane, and Peroxisome biogenesis network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_030471	Peroxisomal membrane protein PEX16. (369 aa)
	C1H46_023707	Uncharacterized protein. (327 aa)
	C1H46_021621	Uncharacterized protein. (109 aa)
	C1H46_017725	Uncharacterized protein. (283 aa)
	C1H46_009988	Uncharacterized protein. (247 aa)
	C1H46_007545	GST N-terminal domain-containing protein. (153 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_007545	C1H46_009988	A0A540N705	A0A540N039	GST N-terminal domain-containing protein.	Uncharacterized protein.	0.960
C1H46_007545	C1H46_017725	A0A540N705	A0A540MD20	GST N-terminal domain-containing protein.	Uncharacterized protein.	0.719
C1H46_007545	C1H46_021621	A0A540N705	A0A540M1X6	GST N-terminal domain-containing protein.	Uncharacterized protein.	0.857
C1H46_007545	C1H46_023707	A0A540N705	A0A540LWA3	GST N-terminal domain-containing protein.	Uncharacterized protein.	0.782
C1H46_007545	C1H46_030471	A0A540N705	A0A540LBW1	GST N-terminal domain-containing protein.	Peroxisomal membrane protein PEX16.	0.860
C1H46_009988	C1H46_007545	A0A540N039	A0A540N705	Uncharacterized protein.	GST N-terminal domain-containing protein.	0.960
C1H46_009988	C1H46_017725	A0A540N039	A0A540MD20	Uncharacterized protein.	Uncharacterized protein.	0.987
C1H46_009988	C1H46_021621	A0A540N039	A0A540M1X6	Uncharacterized protein.	Uncharacterized protein.	0.878
C1H46_009988	C1H46_023707	A0A540N039	A0A540LWA3	Uncharacterized protein.	Uncharacterized protein.	0.996
C1H46_009988	C1H46_030471	A0A540N039	A0A540LBW1	Uncharacterized protein.	Peroxisomal membrane protein PEX16.	0.991
C1H46_017725	C1H46_007545	A0A540MD20	A0A540N705	Uncharacterized protein.	GST N-terminal domain-containing protein.	0.719
C1H46_017725	C1H46_009988	A0A540MD20	A0A540N039	Uncharacterized protein.	Uncharacterized protein.	0.987
C1H46_017725	C1H46_021621	A0A540MD20	A0A540M1X6	Uncharacterized protein.	Uncharacterized protein.	0.820
C1H46_017725	C1H46_023707	A0A540MD20	A0A540LWA3	Uncharacterized protein.	Uncharacterized protein.	0.859
C1H46_017725	C1H46_030471	A0A540MD20	A0A540LBW1	Uncharacterized protein.	Peroxisomal membrane protein PEX16.	0.829
C1H46_021621	C1H46_007545	A0A540M1X6	A0A540N705	Uncharacterized protein.	GST N-terminal domain-containing protein.	0.857
C1H46_021621	C1H46_009988	A0A540M1X6	A0A540N039	Uncharacterized protein.	Uncharacterized protein.	0.878
C1H46_021621	C1H46_017725	A0A540M1X6	A0A540MD20	Uncharacterized protein.	Uncharacterized protein.	0.820
C1H46_021621	C1H46_023707	A0A540M1X6	A0A540LWA3	Uncharacterized protein.	Uncharacterized protein.	0.819
C1H46_021621	C1H46_030471	A0A540M1X6	A0A540LBW1	Uncharacterized protein.	Peroxisomal membrane protein PEX16.	0.804